Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1993 |
Symbol | |
ID | 7402012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1987356 |
End bp | 1988555 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643709064 |
Product | TrkA-N domain protein |
Protein accession | YP_002566641 |
Protein GI | 222480404 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0873902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGA CCCGTGATTG GGTGACCGTG CGGGCGTCGA TCCTCCTGAC GTTCGCGGTC GCGATACTGT CGATCCTCGC CGGTCTCGCC CAGATCGGGG GGCTCGGCGT CGACGGTCCG CTGTCCCTGT ACGTGCCCGC GGTCGTCCGC CAGACCGTCG GGTTCACTGG GACGATAACC GGTTTCTCGA TGCTCGGGAG CAGCTTCGCG CTGCGGAACG GCTACCGCGT CGGTTGGTAC TCCACGGCGG TCCTACTCCC GCTGACCGCG ATTCAGGGGC TGATGCAGGC GTCGGTGCTG TCGTTCCCGC TGGTGGCGTT GTCGATCGTG TCGATGCCCG CACTCGCGTA CAATCGCGGT CGATTCGACA GGCCGTTCTC GCCGTCGCCG ACCCAACTCG CTGCGGGCGC GGCGCTCGTG ACCGCAATCT CGTACGGGAC GATCGGCACG TACGCGCTCC GCGACCAGTT CAACGGGGTC GAGACCATCG TCGACGCGTT CTACTTCACC GTCGTCACCG CCTCCACGGT CGGCTACGGA GACGTGACTC CGGTGGCCGG CGCGGCCGCC GACATCGCGC AGTTGTTCGT GCTCTCCTCG CTCGTGATGA ACGTCGCCGC GTTCGCGGTG GCGCTCGGGG TTATTCTCAC CCCGGCTATC GAGGCGCAGC TCTCCAAGGC GCTTGGAAAA ATGACCGATA AACAGATCGA CCTCCTCGAC GACCATGTCC TCGTGCTCGG CTACGGGGAC CTGACCGAAC CGATCCTCGA AGAACTCGAC GCCCGCGACG GGACCAAGTA CGCGGTCGTG ACCACCGACG AGACCGCTGC GAGGCGACTG AGCGAACGCG ACGTGCCCGT ATTCACCGCG GACCCGAGCG ACGTCGACCC GCTCGAACGG GTGAATATTC AGGGCGCCCG GGCGGTCGTC GTCGCAACGA ACGACGATGC GCGGGATGCG CTCGCGATCC TCACCGCCAG ACAACTCAAC CCCGACGTGC GGATCGTCGC TGCGGTAACC CAGCGAGAGA ACGTCAACAA GCTCCGCCGG GCCGGCGCGG ACCAGGTAAT CTCGCCCGCG ACGCTGGGCG GCCACATTCT CATTGACTGC GCGTTCGGCG CGGACAGTGA GGACGCGACG ACCGACCTCC TCGGCGATTC GATTGACGAC GTAGAAGAAC TCGACGACTC GTCCGCTTGA
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Protein sequence | MELTRDWVTV RASILLTFAV AILSILAGLA QIGGLGVDGP LSLYVPAVVR QTVGFTGTIT GFSMLGSSFA LRNGYRVGWY STAVLLPLTA IQGLMQASVL SFPLVALSIV SMPALAYNRG RFDRPFSPSP TQLAAGAALV TAISYGTIGT YALRDQFNGV ETIVDAFYFT VVTASTVGYG DVTPVAGAAA DIAQLFVLSS LVMNVAAFAV ALGVILTPAI EAQLSKALGK MTDKQIDLLD DHVLVLGYGD LTEPILEELD ARDGTKYAVV TTDETAARRL SERDVPVFTA DPSDVDPLER VNIQGARAVV VATNDDARDA LAILTARQLN PDVRIVAAVT QRENVNKLRR AGADQVISPA TLGGHILIDC AFGADSEDAT TDLLGDSIDD VEELDDSSA
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