Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1946 |
Symbol | |
ID | 7399898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1944997 |
End bp | 1947201 |
Gene Length | 2205 bp |
Protein Length | 734 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643709017 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_002566594 |
Protein GI | 222480357 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0751397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.355386 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGCG GAAACGACGA CGAGCCCTCG CCGCCGGACG GCGGGTTCTT CTCGTCTGTC GTCGAGGAGA GCAGGGATCC GATCGTCTCG ATCGACGATG CCGGCGCGAT CGTCTACGCC AACCCCGCCG CCGAGGACGC CCTCGGCCGC GACGCAGCGT CTCTCGCGGA CCGTCGGCTC GCGGAGCTGA TCCCGGATGC GACCACCAAC CGACGAGCGG CCTCGCTCCG CGATCGGCTC GTCGAGCCGG CGCGGCTCGA CGACGCGGGC GACGTTTCGG TGCCGCTGGC GGCGGCCGAC GGGGAGACGC GCACTTTCTC GGTGCGGTTC CATGCACACG ATGTCGACGG CAAACCCGTG TACACCGGCG TGTTCCGCGA GCGAAGCAGC GGTGACCGTG ACCGCGAGTT CCGGACGTTT CGGAATCTCG TCGAACACGC GGGACACGCG ATCTACGTCA CCGACACCGA CGGGACGATC GAGTACGTCA ACCCGGCGTT TACTCGCCAC ACCGGCTACG AGCCCGAGCA GGTGATCGGG GAGACGCCGG CGGTGCTCAA CTCCGGTGAG ATGTCCGACG AGTACTTCGT GTCACTGTGG GAGACGCTCT GCGCCGGCGA GGTGTGGGAA GAGGAGATCG TCGACCGCCG GAAAGACGGG ACTCACTACC ACGCTCACCA GACGATCGCG CCCGTATTCG ACGACGCCGG GACGGTGTCC CGGTTCGTCG CCATCCAGAC CGACGTGACG GAGCGGAAGG CGGCCGAGGG GAAGCTGAAA CAGTACCGCG ACATCGTCGA GCGGCTCGAC GACCCCATCA TGTTGCAGAA CCGCGACGGC GAGTTCGAAC TGCTCAACGA GGCGGTGAGC GAGTTCGCCG GTACCTCCCG CGAGGAACTG TACGACGACG ACGAGACCGC GTTCATGGAC ACCGAAACGG CCGCGGAGAT CGACGAGCGA CGACAGGAGG TGCTCCGGAC GGAGGAGCCG GTCGAGTACG AGGTGTCGCC GTCGTTCGAG CGGAGCGGTC GCGACGCGAC GTTCAGCACC CGGCGGTACC CGTACTACGA CGGCGCCGAG GCGCTCGCGG GGACGTTTGC GATCTGTCGG GACGTCACCG AGATCAAGGA ACGGGAGGCC GACCTGGAGC TATACGAGCG CGCAGTCGAC GGCGCGACGG ATCTGATCGC CGCGGTCGAC CGCGACGAGC GGTTTCTGTT CGCGAACGAG CAGTACCGGA CGTACCACGG GATCGGCGAC GCGGACATCA CCGGGCTCAC ACTGGCCGAT GCCGTCGGTG ACGACAGCTA TCCGGACGTG CGGCGGCAGA TGACTCGAGC ACTCGCAGGG CAGTCAGTGG AGTACCGCGC GATGCGGAGG CATCCCGTCC GCGGGACACG AATGTTCGAC GTGCTGTACT ACCCGCTGGA AGGGCCGGAT AAGGAAGACA ACCGCGTCGT CGGCGTCGTC GGAGTCCTCC GCGACGTGAC GGACAGCGAG AATCGCGCGC ACCAGCTTCG GGTCGTAGAC CGCGTCCTCC AGCACAACCT CCGGAACGCG ATGACCGTCG TCCGCGGCCG GGCGCAGCAG ATAGCCGACA CAGCGGGAGA GCGTGAGGCA GCCGCGGACG AGGGTGCGGC AGCCGGAGAC GTCGACTCGG TCGCAGCGGG CGCCGCCGAC ATCGCCGCGC GGGCCGAGGC ACTGCTGTCG ACGAGCGAGA AGGTCCACCA GATCACCGAG GTGTTGAGCG ATCCACCGGA GACCGAGCCG GTCGACGTCG CACGAGCGGT CGAGGCGGTC GCGGCCGAGA TCGCCGACGC GTTCCCCGAG GCATCGGTGA CCGTGTCGAC TCCGGACGGG ACAGTCCACG CGTCGGCGAC AACATGGATC GACTGGGCGA TAGACGAACT GGTCCGGAAC GCGATCGTCC ACCACGACCG CGAGTCGCCG ACCGTCGAGA TCACGGTCAC CGCGGCTGAG GATACGGTCA CGGTCACCAT CACGGACGAC GGACCGGGGC TAACCGGGAT GAACCGAGAC GTGTTAGAGA CCGGCGAGGC CGTCGACGCC CTGTACCACG GCAGCGGGCT CGGCCTCTGG CTCGTCTACT GGGTGGTCCA GCAGTCGGGC GGCGACGCGG CGGTCCGCGA CGCGACGCCC CGCGGGACGG TCGTGACGGT CACGCTCCCC CGATCGGATC GGTGA
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Protein sequence | MSRGNDDEPS PPDGGFFSSV VEESRDPIVS IDDAGAIVYA NPAAEDALGR DAASLADRRL AELIPDATTN RRAASLRDRL VEPARLDDAG DVSVPLAAAD GETRTFSVRF HAHDVDGKPV YTGVFRERSS GDRDREFRTF RNLVEHAGHA IYVTDTDGTI EYVNPAFTRH TGYEPEQVIG ETPAVLNSGE MSDEYFVSLW ETLCAGEVWE EEIVDRRKDG THYHAHQTIA PVFDDAGTVS RFVAIQTDVT ERKAAEGKLK QYRDIVERLD DPIMLQNRDG EFELLNEAVS EFAGTSREEL YDDDETAFMD TETAAEIDER RQEVLRTEEP VEYEVSPSFE RSGRDATFST RRYPYYDGAE ALAGTFAICR DVTEIKEREA DLELYERAVD GATDLIAAVD RDERFLFANE QYRTYHGIGD ADITGLTLAD AVGDDSYPDV RRQMTRALAG QSVEYRAMRR HPVRGTRMFD VLYYPLEGPD KEDNRVVGVV GVLRDVTDSE NRAHQLRVVD RVLQHNLRNA MTVVRGRAQQ IADTAGEREA AADEGAAAGD VDSVAAGAAD IAARAEALLS TSEKVHQITE VLSDPPETEP VDVARAVEAV AAEIADAFPE ASVTVSTPDG TVHASATTWI DWAIDELVRN AIVHHDRESP TVEITVTAAE DTVTVTITDD GPGLTGMNRD VLETGEAVDA LYHGSGLGLW LVYWVVQQSG GDAAVRDATP RGTVVTVTLP RSDR
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