Gene Hlac_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1923 
Symbol 
ID7399875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1926396 
End bp1927244 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content70% 
IMG OID643708994 
Producthypothetical protein 
Protein accessionYP_002566571 
Protein GI222480334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.465478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA CGACCGAGCC GGCGGACGGG AGCCCGGACC TGCTGGACGA CGCGCGGGAG 
GCGCTCCGGA CCGAGCACCG GCGCGTCGGC GACGAATACG GGGCGTTCCG CGCCTTCCTC
GGGCGCGTCG CGTCCGTCCC GTCGGAGCCG ATTCGGACCG ACGGCGGCGC GGGACCGATC
GCGGGCAGTG GCGGTTCAAT CGGAGTCGCC AGGGGAGCCA GCGCGGTCGG AACCGCCGGC
TCCTCCAGCG CGGGGCCGCC GGCGGGGTCG GGACTCGTCG CGGTCAGGGA CGCGTACCAG
GAGACAGTGA TGTCCGTCCC GCACTACGAG ATCGAGTACG ACGACACCTA CCAGCGGAGC
GTCGCCGAGG AGTGCGGCCC CGAACTGGCG TACGCGCTCA CTCGCGGGTC GCGGTTCCAC
GCCGAGTGTA AGCGATCCCT GATCGACAGA GTCGAGACCG CTATCGAGGA ACGCGAGCGA
TTCGTCGAGA CGATCCGATC GGAGACGGAG TCGGTCGAGC GGGCCGCCTC CCGACTCGCC
CCGATCCAGA GTGAGGTCGC GTCGACCGCC CGGACGGATT TCACCGAGGA CGGATTCGGG
ACGCTTGACG CCTATCGCGC CCGGGCCGAG GCGCTGATCG GCGACTGCGA TCGGATCGCC
ACGCGCCGCC AGCGAGAACT CGCGTGCTAC GAGCGCGACC TCGCGATCGA CGGTGATCTC
GACGTTCCCA CGTACCTGTA TCAGGACCTC GACGCGACGT ACCCCGTCTT GGCGACGGTC
GGAACCGTCG GCGACCGGCT CGACGACCTG AAGCGCCGGA TCGAGCGAGC GATGGCCCAC
GCGAGCTGA
 
Protein sequence
MATTTEPADG SPDLLDDARE ALRTEHRRVG DEYGAFRAFL GRVASVPSEP IRTDGGAGPI 
AGSGGSIGVA RGASAVGTAG SSSAGPPAGS GLVAVRDAYQ ETVMSVPHYE IEYDDTYQRS
VAEECGPELA YALTRGSRFH AECKRSLIDR VETAIEERER FVETIRSETE SVERAASRLA
PIQSEVASTA RTDFTEDGFG TLDAYRARAE ALIGDCDRIA TRRQRELACY ERDLAIDGDL
DVPTYLYQDL DATYPVLATV GTVGDRLDDL KRRIERAMAH AS