| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1861 |
|---|
| Symbol | |
|---|
| ID | 7400054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1865518 |
|---|
| End bp | 1867035 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643708931 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002566509 |
|---|
| Protein GI | 222480272 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.876271 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0686016 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGTC AGGGAACCCA CCGCGACGAC GAACTCGGCA TCGACGACGA CACGCGTGCG
ACCGTCGACG GCGAGGAACT GCTGAACAAC CTCGAAATCA ACGCCGCAGA GATCGAACGA
CGGAAGCGGC ACAGCCGGTT TGACGAGCGG GACGCCGCGC GGCTCTCGTC GATCGCGGAC
GACGTCGACG CGGTCGCGGA CGACATCGTC GACGAGTTCT ACGACCACAT CGACTCCGAT
CCGGAGGTCC GGGCGGTACT CGACCGGTCG TCGCTCCCCA TGTCGGCGCT CGTCGCCGGC
CAGCGACGGT ATCTCACCGG GGTAGTGGGC GGCGACTACG GCCGAGACTA CTTCGCCGAC
CGAGCGCGAG TGGGGCGACT CCACGACCTG CTCGGGCTCG AACCCGACGC CTACCTCGGG
CAGTACGCGG TGTACTACGA GCGGCTCTTC GATGTGCTGG CGGAGCGGGC CGTCGACGGG
AACGGTGAGA ACAGAAACAG CGAGGGCGGA GCGACCGATG ACACCGCCGA GGCGGTCGAA
CAGTTCCGAG ATGAAGCGCT GTCGGTGCTC AAGGCGTTCC TCCTCGACCA ACAGCTCGCG
ATCGACACGT ACGTCGACTC GTACGTCACG GAGGCGGAAC GCGAGGCCCG TCGCCAGCGG
GAGCTCTCGC GGCGCGTCGC CGAACAGATC GGCGAGCCGG CGGCGGCGCT CCGCGAAACC
ACCGCGGAAG TCGCCGAGGA GAGCGACCGG ATCGACGAGC TCGCCGGCCG ACAGTCGGAC
CGGATGGACG ACCTCTCGCG AGAGGCCAAC GAGATGACCG CGACCGTTGA GGAGGTCGCC
GCCACTGCCG ACGAGGTGGC CGCGACCAGC GACGACGCCG CCGGTCTAGC TGCCGAGGGC
GTCGATGCCG CCAGCGACGC GACGGAGACG ATGGAAGAGG TCCGCGAGGC CACCGAGGCC
GTCCGCGAGG AGATGGCCGA TCTCCAGGAG CAGGTCGACG AGATCCGGGG CGTCACCGAC
GTGATCGGCG ACGTGGCGGA CCAGACGAAC CTGCTCGCGC TGAACGCCTC TATCGAGGCT
GCCCGTGCGG GTGAGGCCGG CTCCGGCTTC GCGGTCGTCG CCGACGAGGT GAAGTCGCTC
GCGCAGGACG CCAGCGACCA CGCCGCAGAC ATTGAGGATA CGGTCGAAGA GGTGGCCGAC
AGCGGCGAGG CGACGCTCGA CGAGCTCGAA CGCGTCGCGG ACCGAGTCGC GGACGGAACC
GAGCAGGTCG ACGAAACGGT AACGCGGTTA GAAGCGATCG AGAGCGCGGT CGTCGACGCC
TCCGATGGGA TCGCCGAGGT GTCGGACGCG ATGGACTCAC AGGCGACCTC CGTCGAGGAG
GTGGCGGCCA TGGTCGACGA CTCGACCGAG TCGGCGGAGA CGGTCGCTAA CAGTGCGAGC
GAGATCGCCG CCACGACGGA TCGACAGCGC GAGCGCGTCG ACGAGATCGC CGACTCGGCG
GCGGAGCTCA CGGAGTAG
|
|---|
| Protein sequence | MSSQGTHRDD ELGIDDDTRA TVDGEELLNN LEINAAEIER RKRHSRFDER DAARLSSIAD
DVDAVADDIV DEFYDHIDSD PEVRAVLDRS SLPMSALVAG QRRYLTGVVG GDYGRDYFAD
RARVGRLHDL LGLEPDAYLG QYAVYYERLF DVLAERAVDG NGENRNSEGG ATDDTAEAVE
QFRDEALSVL KAFLLDQQLA IDTYVDSYVT EAEREARRQR ELSRRVAEQI GEPAAALRET
TAEVAEESDR IDELAGRQSD RMDDLSREAN EMTATVEEVA ATADEVAATS DDAAGLAAEG
VDAASDATET MEEVREATEA VREEMADLQE QVDEIRGVTD VIGDVADQTN LLALNASIEA
ARAGEAGSGF AVVADEVKSL AQDASDHAAD IEDTVEEVAD SGEATLDELE RVADRVADGT
EQVDETVTRL EAIESAVVDA SDGIAEVSDA MDSQATSVEE VAAMVDDSTE SAETVANSAS
EIAATTDRQR ERVDEIADSA AELTE
|
|---|
| |