Gene Hlac_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1849 
Symbol 
ID7400041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1854099 
End bp1854350 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content66% 
IMG OID643708918 
Producttranslation initiation factor IF-1A 
Protein accessionYP_002566497 
Protein GI222480260 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00523] eukaryotic/archaeal initiation factor 1A 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0438974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.244993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG ACGACGAAGT GTTCGCCGTG GTGACGGAAC ACCTCGGCGG AAACCACGTG 
CGGCTGCGCT GCGTTGACGG CAAGACGCGA ATGGGCCGGA TCCCCGGCCG CATGAAGTAC
CGGACGTGGA TCAGCGAGGG CGACGTGGTC CTCGCGGAGC CGTGGGCCTG GCAAGACGAG
AAGGCGAACG TCGAGTGGCG GTACGACGAC GACGACGCGG ACCAGCTCCG ACGCGAAGGC
CACATTCAGT AA
 
Protein sequence
MPNDDEVFAV VTEHLGGNHV RLRCVDGKTR MGRIPGRMKY RTWISEGDVV LAEPWAWQDE 
KANVEWRYDD DDADQLRREG HIQ