Gene Hlac_1767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1767 
Symbol 
ID7399639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1784914 
End bp1785633 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID643708832 
Producthypothetical protein 
Protein accessionYP_002566416 
Protein GI222480179 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00475072 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTGACG CCTTCGGACG CGCGATCCGC GATCATCACC GTGGTGACCG GACTACCCCT 
CTCCGACAGG GCGACGGCGA GGAGACGCGT GAACACCCGA TCGGGGCGTT CTACTTCGAC
GCGTTCGACG CCGAGAGCAA CGCGGGTTCG TGGCTCACAT CGCGGCTTTC GGGCCCGCTC
GTCGACCTCG GAGCGGGGGC GGGCCGGCAC GCGCTGCGGT TTCAAGGGCG GTTCGAGACA
GTTGCGGTCG AGACCAGCCC AGCACTCGTC GAGGCGATGC GCGACCGCGG CGTCGTGGAT
GTCCGCGAGG GCGACATGTT CGCCCTCCGA GACGCGTTCG AGCGGGATCG GTTCGCGTCG
GCGCTCGCGA TCGGCACGCA GATCGGACTG GCGGGCTCGA TGCGAGGGCT CTCGGCATTT
CTCGGCGACC TCGCGTTCGT GACGACGCCC GGCGCGACGG CCGTGATCGA TTCTTACGAC
CCGGATCACC CCGGAGCCGC TGACCTCCTC GGGTACCGCG AGGACCCGAC GCCGGGGCTC
GCGCATCGCG TCATGTGGTT CGCGTACGAC GGGGAGACGG ACCCGACGCT CCATTTCAGG
CTGTTCGCCC CCGACCGGCT CCGCGAAGCG GCGATCGGGA CGGGATGGGA GGTCGAGGCG
GTGGACCGCG AGGGGACCGG AGACGGGCCC CACTACCGGG CCGCGCTCCG GAAGCGGTAG
 
Protein sequence
MPDAFGRAIR DHHRGDRTTP LRQGDGEETR EHPIGAFYFD AFDAESNAGS WLTSRLSGPL 
VDLGAGAGRH ALRFQGRFET VAVETSPALV EAMRDRGVVD VREGDMFALR DAFERDRFAS
ALAIGTQIGL AGSMRGLSAF LGDLAFVTTP GATAVIDSYD PDHPGAADLL GYREDPTPGL
AHRVMWFAYD GETDPTLHFR LFAPDRLREA AIGTGWEVEA VDREGTGDGP HYRAALRKR