Gene Hlac_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1717 
Symbol 
ID7400474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1733081 
End bp1733614 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID643708784 
Producthypothetical protein 
Protein accessionYP_002566370 
Protein GI222480133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGC CGCGCGTCCC GGGCGACGAC GAGAACACGC TAGAGCTGCC CTGCGGGCAG 
ACGATGGTGG CCGGCGAGCT GGATCTGGGG ATGCGTGAGT TCAAGTGCGA TTGCGGCGAG
ACGCACGCGG TCGTGATGGA CGTGCATCCC CCGGAGCGGT TCCTCCCGGA CTTTCTGGTC
GAGGTGCTCC GCGAGGCGAT CGAGACCACG AGCGAGGAGA TGCCGGAGTT CGACACGCCG
CATCTGCTTG GGGTCGTCTT AGAGGAGTTT CCGGAGGCGG TCGTCGCGTA CGACGCCAGC
GAGAACGCCG ACGTGGGGTA CGCGATGGCG TGGGTGACTG AGTTCGACTC GCGCCGACTC
CACGAGATCG TCGTCGAGCT CGTCGTCGAG CTGATGGAAC ACGCCGTGAG CCACGCCGAC
GACGACGAGG CGCTCTCGGC GTTCGAGCAA GAAATGGTCG AGTTCGACGT GGCGGAGTTC
GTCGATCAGT ATCGCGCTGA GCGCGACCTT GAGGCCGAAG ACCCGTACGC CTGA
 
Protein sequence
MSQPRVPGDD ENTLELPCGQ TMVAGELDLG MREFKCDCGE THAVVMDVHP PERFLPDFLV 
EVLREAIETT SEEMPEFDTP HLLGVVLEEF PEAVVAYDAS ENADVGYAMA WVTEFDSRRL
HEIVVELVVE LMEHAVSHAD DDEALSAFEQ EMVEFDVAEF VDQYRAERDL EAEDPYA