Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1708 |
Symbol | |
ID | 7400465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1726288 |
End bp | 1726812 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643708775 |
Product | Transcription factor TFIIE, alpha subunit |
Protein accession | YP_002566361 |
Protein GI | 222480124 |
COG category | [K] Transcription |
COG ID | [COG1675] Transcription initiation factor IIE, alpha subunit |
TIGRFAM ID | [TIGR00373] conserved hypothetical protein TIGR00373 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTG AGGATCTACT GAACGACCCC GTCATCCAGA AGTACCTCCA CGAGCTGGTG GGGCCGACGG GGATGCCGGT CGCGGCCGCA CCGCCCGACG GTGAGGTCAC CGATGAAGAG CTGGCGGAGG AGCTCGGGTT GGAGCTCAAC GACGTCCGAC GCGCGCTGTT CATCCTGTAC GAGAACGACC TCGCCACCTA CCGTCGGGTG CGCGATGAGG ACTCGGGGTG GCTCACGTAC CTCTGGACGT TCCACTACGA CAACATCCCG GAGAATCTCG AAGAGGAGAT GTACCGCCTG CTCGACGCCT TAGAGGAGCG CGAGGAGTAC GAGCGCACCC ACGAGTTTTA CCTCTGTGAG GTGTGTTCGA TCCGCTTCGA GTTCGGCGAG GCAATGGACT TCGGCTTCGA GTGCCCCGAG TGCGGCTCTC CGGTCGAGGC GATGGACAAC GACCGGCTCC GCGAGGCGAT GGGGCAGCGC GTCGAGAAGC TCCGTAACGA GCTCAACGTG GACGTGACGG GCTAA
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Protein sequence | MAFEDLLNDP VIQKYLHELV GPTGMPVAAA PPDGEVTDEE LAEELGLELN DVRRALFILY ENDLATYRRV RDEDSGWLTY LWTFHYDNIP ENLEEEMYRL LDALEEREEY ERTHEFYLCE VCSIRFEFGE AMDFGFECPE CGSPVEAMDN DRLREAMGQR VEKLRNELNV DVTG
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