| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1706 |
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| Symbol | |
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| ID | 7400463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1724976 |
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| End bp | 1725848 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643708774 |
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| Product | UspA domain protein |
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| Protein accession | YP_002566360 |
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| Protein GI | 222480123 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.873691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAACG AGATCTTGGT TCCGACAGAC GGGAGCGCTG CTGCGGGAAC AGCAACTGAA
ACAGCGCTTG ACCTCGCACA ACGCTTCGAC GCCTCGCTCC ACGCGATTAC CGTCGTTGAA
CTGGACGAGC CTCCGGCTGA CGTTGAATCG GAAGTTGCTG AGGAAGGAAC TCAACGCGGG
GAGAAGACGC TAGCGACACT CAGGAATCAG GCGGCTGACG TCGGCGTTTC AGCGACGACT
CACGTCATAG AAACCGCTGA CCCGGTCCAC CAGACGATCA TCGACTACGC GAGAGACCAC
GACGTAGATC TCATCGTGAT GGGGACGCAC GGACGAACAG GGTTGAATCG TCTCGTCCTC
GGCAGCGTAA CCGAGCGGAC GCTTCGCACC TCGCCGGTGC CCGTCCTTAC CGTCCACGAG
GACACCACGC TCGATTCCGA CTTCGAGACG GTCCTCGTTC CGACGGACGG CAGCGACGCG
GCGAACGTTG CTGCGAATCA CGGGATAACT ATCGCAGAGG CGACCGATGC AGCGATGCAT
GTCATTCACG TCGTCGATCT CACCGCCGTC TCGGGAGAGT TCGGTAGTGC TGAGGTGCTA
ACTGCATTAG AGGAAGCAGG GCAACAAGCC GTCGACGACG TCATTCATCG AGCCGAAGAC
GCGGGTCTGC GATCTGTGGA GGCATCGATT CTGAGTGGGA CACCTGCCCG AGCCATCTTG
GACTACGCGG AAGAACGCGA TATCGACCTC ATCGTGATGG GGACGCACGG CCGAACCGGC
CTAGAACGGT ACCTCCTCGG GAGCGTCACC GAGAAAATCG TCCGTGTCGC AGACGTCCCC
GTACTGACCG TCTCACTGCC TGAAAAACAG TAA
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| Protein sequence | MYNEILVPTD GSAAAGTATE TALDLAQRFD ASLHAITVVE LDEPPADVES EVAEEGTQRG
EKTLATLRNQ AADVGVSATT HVIETADPVH QTIIDYARDH DVDLIVMGTH GRTGLNRLVL
GSVTERTLRT SPVPVLTVHE DTTLDSDFET VLVPTDGSDA ANVAANHGIT IAEATDAAMH
VIHVVDLTAV SGEFGSAEVL TALEEAGQQA VDDVIHRAED AGLRSVEASI LSGTPARAIL
DYAEERDIDL IVMGTHGRTG LERYLLGSVT EKIVRVADVP VLTVSLPEKQ
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