| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1686 |
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| Symbol | |
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| ID | 7400443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1706140 |
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| End bp | 1706565 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643708755 |
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| Product | UspA domain protein |
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| Protein accession | YP_002566341 |
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| Protein GI | 222480104 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00978672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTATC TTGTTGCAAC CGACGGATCG ACCGAGAGCG ACAAAGCCAT CCGGTACGCC
GCGCGGCAGG CGGTCGCGTT CTACGAGACG CTGGTGATCG CCCACGTGTT AACGCCCGAC
TCGGAGCTCA TCGATGGGAC GCTCATCCTC CCGGGCGAGG AGGCCGCCGT CGAGGCTGGC
GAGGATATTC TCTCGAACGC CCGACGGCTC GCCGACGAGG CGGTCGGCGA CGAGTCGATC
GACATCGAGA CGCAGTTGCT CACCGGACGG CCAGCCGATG CAATCACCGG GTACGCCCGT
GAACAGCCGG TCGACGCCAT CTACGTCGGC CACCGCGGGC TGAGCGAGGA GCGCGAGCAG
GTCGTCGGCA GCGTCGCGAA GAGCGTCGTC GACAAGGCCA ACGTGCCCGT GACGGTGATC
CGGTAG
|
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| Protein sequence | MSYLVATDGS TESDKAIRYA ARQAVAFYET LVIAHVLTPD SELIDGTLIL PGEEAAVEAG
EDILSNARRL ADEAVGDESI DIETQLLTGR PADAITGYAR EQPVDAIYVG HRGLSEEREQ
VVGSVAKSVV DKANVPVTVI R
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