Gene Hlac_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1679 
Symbol 
ID7400436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1698325 
End bp1699080 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content72% 
IMG OID643708748 
ProductF420-0--gamma-glutamyl ligase 
Protein accessionYP_002566334 
Protein GI222480097 
COG category[S] Function unknown 
COG ID[COG1478] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01916] F420-0:gamma-glutamyl ligase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGT TCGCCGTTCC GGGCCTCCCG GAGATCCGGG ACGGAGACGA TCTGGCGGCC 
ATGATCGACG AGCGCGTCGA CCTCCGCGAG GGCGACGTGG TCGTCGTCGC CAGCACGGTC
GTCTCCAAGG CGGAGGGGCG GACCTTCGAC CTCTCGGACT TCCCGGCGAG CGAGCGCGCG
GAGGCGGTCG CCGACCGGCT CGCCGAAATC GCCGGCGAGG AGAAGGACCC GCGCTTCGCG
CAGGCCGTCA TCGAGGAGTC GACGGAGCTG ATCATGGAGG CGCCGTTCCT CCTCACTGCG
ACCCGCTTCG GCCACATCGG CGTCAACGCC GGAATCGACC AGTCGAACGT CCCCGACGGC
GACCTACTGC TGCTCCCGGA GCGCCCCTCC GAGAGCGCGG CGCGCATTCG CGAGGGGATC
GCGGCCGACC GCGTCGTCGT CAGCGACACC TGCGGGCGCC CGTTCAGACA CGGCCAGCGC
GGGGTCGCGA TCGGCTGGGC CGGGCTCCCG GCCAGCCGCG ACTGGCGCGG CGAGCGCGAC
CGCGACGGCC GCGAGATGGG CGTCACCGTC CAGAACGTGA TCGACGAACT CGCGTCGGCC
GCCAACCTCG TCGCCGGCGA GGGCGACGGC GGCACCCCGG TCGTCGTCGT CCGCGACTGG
GAATTCGGCG ACCACGACGG CTCGGACAAC CACTTCCGCG AGGTCGAGGG CGACTTCGTG
CGGCAGGCCC TCCGGCAGTG GACATTCGAC GACTAA
 
Protein sequence
MELFAVPGLP EIRDGDDLAA MIDERVDLRE GDVVVVASTV VSKAEGRTFD LSDFPASERA 
EAVADRLAEI AGEEKDPRFA QAVIEESTEL IMEAPFLLTA TRFGHIGVNA GIDQSNVPDG
DLLLLPERPS ESAARIREGI AADRVVVSDT CGRPFRHGQR GVAIGWAGLP ASRDWRGERD
RDGREMGVTV QNVIDELASA ANLVAGEGDG GTPVVVVRDW EFGDHDGSDN HFREVEGDFV
RQALRQWTFD D