| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1650 |
|---|
| Symbol | |
|---|
| ID | 7399600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 1671557 |
|---|
| End bp | 1672156 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643708717 |
|---|
| Product | manganese and iron superoxide dismutase |
|---|
| Protein accession | YP_002566305 |
|---|
| Protein GI | 222480068 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0605] Superoxide dismutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.140081 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACG AACTTGATCC GCTGCCGTAC GATTACGACG CGTTGGAACC GCACCTTTCG
GAGCAGGTGC TGGAATGGCA TCACGACACG CACCATCAAG GGTACGTGAA CGGGTGGAAC
TCGGCCGAGG AGACGCTCGA AGCGAACCGC GAAGAGCACG ACTTCTCGTC GTCGGGCGGG
GCGATCCGGA ACGTGACCCA CAACTCGTCG GGTCACATCC TGCACGACCT GTTCTGGCAG
AACATGAGCC CGGAGGGCGG CGACGAGCCC GATGGCGCGC TGGCCGACCG GATCGCGGAG
GACTTCGGCT CGTACGACGC CTGGAAGGGC GAGTTCGAGG CGGCGGCGTC CGCCGCGTCC
GGCTGGGCGC TCTTAGTGTA CGACACATTC TCGAACCAGC TGCGGAACGT CGTGGTCGAC
AAGCACGACC AGGGCGCGAT CTGGGGCGGT CACCCGATTC TGGCGCTGGA CGTGTGGGAG
CACTCCTACT ACCACGACTA CGGCCCGGCT CGTGGCGAGT TCGTCGACAA CTTCTTCGAG
GTCGTCGACT GGAACGAGCC CGCGACCCGC TACGAGCAGG CCGTCGAGCT GTTCGAGTAA
|
|---|
| Protein sequence | MSYELDPLPY DYDALEPHLS EQVLEWHHDT HHQGYVNGWN SAEETLEANR EEHDFSSSGG
AIRNVTHNSS GHILHDLFWQ NMSPEGGDEP DGALADRIAE DFGSYDAWKG EFEAAASAAS
GWALLVYDTF SNQLRNVVVD KHDQGAIWGG HPILALDVWE HSYYHDYGPA RGEFVDNFFE
VVDWNEPATR YEQAVELFE
|
|---|
| |