Gene Hlac_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1646 
Symbol 
ID7399596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1669147 
End bp1669497 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content65% 
IMG OID643708713 
Producttranscriptional coactivator/pterin dehydratase 
Protein accessionYP_002566301 
Protein GI222480064 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2154] Pterin-4a-carbinolamine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0328743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC CGCTCGCAGA CGAGCCAGTT GAGCCGGCCG ACGAGGGAGC CGAACCGCTC 
ACCGACGACG AGTACGCCGA GTATCTCGCC GAACTCGGTC CGGTGTGGGA GGTCGTCGAC
GACCACCACC TCGAAGCGAC CTACGAGTTC GACGACTTCG CGGACGCGCT GGCGTTCACG
AACGAGATTG GCGAACTCGC CGAGGCAGAG GGGCATCACC CCGATCTCCA CCTCTCGTGG
GGCGAGGTCG GCGTCGAGAT GTGGAGCCAC GACATCGGCG GGCTCCACGA GTCCGATTTC
GTGATGGCCG CGCGGATGGA TCGTATCTAC GATGGGGACG GCGGCGACTG A
 
Protein sequence
MSSPLADEPV EPADEGAEPL TDDEYAEYLA ELGPVWEVVD DHHLEATYEF DDFADALAFT 
NEIGELAEAE GHHPDLHLSW GEVGVEMWSH DIGGLHESDF VMAARMDRIY DGDGGD