| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1629 |
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| Symbol | radB |
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| ID | 7399578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1652254 |
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| End bp | 1652961 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708695 |
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| Product | DNA repair and recombination protein RadB |
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| Protein accession | YP_002566284 |
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| Protein GI | 222480047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0468] RecA/RadA recombinase |
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| TIGRFAM ID | [TIGR02237] DNA repair and recombination protein RadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.554742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.462396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGATC CGATCCCGAC CGGCTGTCGG CCGGTCGACG ACCTGTTGGG CGGGGGGTTC
GAGCGCGGGG TCGTCACGCA GGTGTACGGC CCGCCAGCGG CCGGCAAGAC GAACCTCGCG
CTCGCGGCGG CCGTCGAGGT CGCGGCCGGC GGCGACCGCG CCCTCTACAT CGACACCGAG
GGGCTCTCCA TCGACCGATT CGAGCAGATG GCCGCGGGCC GGGCCAATCG CCCTGACGTC
GACGAGACGG TCGAAGAAAT CGCCTCGCGG CTGGTGATCT CCGAGGCGTA CGACTTCGAT
GACCAACGCG AGGCCGTCCG CGACGCCGAG GAGCTCGCTG AGGAGATCGA GCTGATCGTG
TTGGACTCCG CGACCGGCTT TTACCGACTG GAGCGCGCCG GCGACACCGA GGGCGGAGAG
TCACTCCGGA AGGTCGCAAA GCAGGTGACG CACCTCCTGT CTCTGGCCCG GCGACACGAC
ATCGCCGTCG TCATCACGAA TCAAGTGTTC ACCGATCCCG ACAGCGATCG CGACCGCGCG
CTCGGCGGTA ACACTCTCAA CCACTGGACC GGCGCGATCG TCCGTGTCGA CCGGTTCCGC
GGCGGGAACC GACGGGTGAC GCTGGAGAAG CATCGCTCGA AGCCCGCGGG CGACACCGCC
ACCTTTCAGA TCGTCGCCGA CGGGCTGGCT GAGAGCGCCG AGACGTAA
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| Protein sequence | MSDPIPTGCR PVDDLLGGGF ERGVVTQVYG PPAAGKTNLA LAAAVEVAAG GDRALYIDTE
GLSIDRFEQM AAGRANRPDV DETVEEIASR LVISEAYDFD DQREAVRDAE ELAEEIELIV
LDSATGFYRL ERAGDTEGGE SLRKVAKQVT HLLSLARRHD IAVVITNQVF TDPDSDRDRA
LGGNTLNHWT GAIVRVDRFR GGNRRVTLEK HRSKPAGDTA TFQIVADGLA ESAET
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