| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1613 |
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| Symbol | |
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| ID | 7399562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1632802 |
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| End bp | 1633779 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643708679 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_002566268 |
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| Protein GI | 222480031 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.817409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.647176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAACG CGGACTTGCG CGACCTCGCA GCGATTCGCG ACATCTCCTT TGCGGAGATC
GAGGGAAGCG TCGTCGCCGT CGACGCGCAC AACTGGCTGT ACCGGTACCT CACGACGACG
GTGAAGTGGA CGGCTGACGA GACGTACACC ACCACCGACG GCGTCGAGGT TGCCAACCTG
ATTGGGATCG TCCAGGGGCT CCCGAAGTTC TTCGAACATG ACCTCATTCC CGTGATGGTG
TTCGACGGGG CGGTGACCGA GCTAAAAGCC GACGAGGTCG CCGACCGCCG CGAGAAGCGC
GAACAGGCGG AAGAGCGCCG GGTGGCCGCC AAGGAGCGCG GCGATGCGGT CGAGGCCGCG
CGACTGGAGG CCCGCACGCA GCGGCTCACC GACACGATTC AGGAGACGAC TCGGGAGCTG
CTCCGGCTGC TCGACGTGCC GATCGTCGAG GCGCCGGCCG AAGGCGAGGC GCAGTGCGCG
CACATGGCGG CGACCGGAAC CGTCGACCAC GCCGGCAGCG AGGACTACGA CACGCTGCTT
TTCGGTGCGC CGACGACGCT CCGCCAGCTC ACGAGCAAGG GCGATCCGGA GCTGATGGAT
CTGGCGGCGA CGCTCGACGA CCTCGGCTTC GACCGACAGG GGCTCGTCGA CGCCGCGATG
CTCTGTGGCA CCGACTTCAA CGAGGGCGTC CGCGGGATCG GGCCGAAGAC GGCGGTAAAA
GCGGTGCGAG AGCACGGCGA CCTGTGGGGC GTCCTCGACG CGCGGGGCGT CGAGATCCCG
AACGCCGAGG CGATCCGCGA GCTGTTCATG GACCCGCCAG CGACGGACGT GGACGTGGAC
ACGGCGGTGA ACCCCGACGT GGACGCCGCC CGCGAGTACG TCGTCGACGA GTGGGGCGTC
GCCGCCGACG AGGTCGAACG CGGGTTCGAA CGCATCGCGG AGTCGCAGGT TCAGACCGGG
CTCGACCGGT GGACGTGA
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| Protein sequence | MGNADLRDLA AIRDISFAEI EGSVVAVDAH NWLYRYLTTT VKWTADETYT TTDGVEVANL
IGIVQGLPKF FEHDLIPVMV FDGAVTELKA DEVADRREKR EQAEERRVAA KERGDAVEAA
RLEARTQRLT DTIQETTREL LRLLDVPIVE APAEGEAQCA HMAATGTVDH AGSEDYDTLL
FGAPTTLRQL TSKGDPELMD LAATLDDLGF DRQGLVDAAM LCGTDFNEGV RGIGPKTAVK
AVREHGDLWG VLDARGVEIP NAEAIRELFM DPPATDVDVD TAVNPDVDAA REYVVDEWGV
AADEVERGFE RIAESQVQTG LDRWT
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