Gene Hlac_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1607 
Symbol 
ID7399556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1626467 
End bp1626943 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content65% 
IMG OID643708673 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002566262 
Protein GI222480025 
COG category[S] Function unknown 
COG ID[COG3837] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.978873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.178437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGTG TTACCGAGAG CGACCTCGAC TGGACTGACA CGGAGCGCGG GGAGACCCGG 
TTTCGCCGAA AGCAACTCGC GGAGGCCGCC GACGGCGACC GCATCGGGTG CAGCCTCTAC
GAGCTTCCGG CCGGCGCGAA ATCGTGGCCG TACCACTATC ACACCGCCAA CGAGGAGGCG
ATATACGTGC TGTCAGGAAG CGCTACCCTG CGACACGACG GAGAGACGGT CCGGATCGAA
GCCGGAGACT ACGTCGCGTT CCCGGCGGAC GAGTCCGGCG CCCACCGCGT CGTCAACGAG
GGTGACGATT CGGTCAGATA CCTCGCGATG TCGACGATGA CCGAGCCGGA CGTGACGGTG
TATCCCGACT CGGAGACGTT CGGCGTGTTC GTCGGATCGC CGCCGGGCGG TCGCGAGGAG
CGATCGCTGT CGGGATACTA TCAGATCGAC GACACCGTCG ACTACTGGGA GCTGTAG
 
Protein sequence
MIRVTESDLD WTDTERGETR FRRKQLAEAA DGDRIGCSLY ELPAGAKSWP YHYHTANEEA 
IYVLSGSATL RHDGETVRIE AGDYVAFPAD ESGAHRVVNE GDDSVRYLAM STMTEPDVTV
YPDSETFGVF VGSPPGGREE RSLSGYYQID DTVDYWEL