Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1572 |
Symbol | |
ID | 7401505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1590310 |
End bp | 1590879 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643708638 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002566228 |
Protein GI | 222479991 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGT ACTCGACGGG CGGTGGCGGC GGCGGCGACG ACGGCGACGC CTGCGAGCTC TGCGGGCGCG AGACCACAGA CCTCCAGCGG GCCACGGTCG CCGGGGCGAA GCTCCTCGTC TGCTCGGACT GCCGCCCCCA CGACGACGCC GGCAACGCGC CCGGCGGGCG CGGCGGATCC GGTGGGAGTC GGGGCGGAAG TTCCGGCGGA AGCCCCGGCG GCGCCAGCTC CGAGTCGACC GGAACCGGGA CGGAGAGCCG GAAGAAGGAA ATCGCCCGCA AGCAGGCGAA GATGTACGAC TCCGCGACCG GCGACTCCAA ACACTGGGAG GAAGGCGGCA CCAACTACGA GTCGGACCGG CTCCCGTACC TCGTCTCCGG CTACGGCGAC GACGTGGCGG CGGCCCGGCA AGACGCCGGA CTCACGGTCG AGGAGCTGGC CGAGGAGCTC GACGTCGACG AGGACGACCT GTTCGCTGTC GAGGACGGTC GGGCCGCGAC CGCCGGCGTC GGCGGCTCCG TCGTCCGCGC GCTCGAAGAG CGGCTCGGCG TCGATATCGT CGACGAGTGA
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Protein sequence | MAKYSTGGGG GGDDGDACEL CGRETTDLQR ATVAGAKLLV CSDCRPHDDA GNAPGGRGGS GGSRGGSSGG SPGGASSEST GTGTESRKKE IARKQAKMYD SATGDSKHWE EGGTNYESDR LPYLVSGYGD DVAAARQDAG LTVEELAEEL DVDEDDLFAV EDGRAATAGV GGSVVRALEE RLGVDIVDE
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