| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1520 |
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| Symbol | |
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| ID | 7401446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 1532512 |
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| End bp | 1533399 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643708582 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002566178 |
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| Protein GI | 222479941 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00453579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCGACGA ATCTGCGCGT CTCACCGGCG GTCGGGCTTG TGATTGCGGT GACCGCTGTG
AGCGGGGGGG CGATTCTCGT CCGCCTCAGT GACGCGCCGA GTTCGGTCGC CGCATTCTAT
CGGGTGCTGT TTACAACGCT CCCGCTGGTC CCCGTCGCAC TCTGGCGCTA TCGGACACAG
CTCGCCGGCA TCACTCGCCA AGACCTCATA TTCGCGACGC TCTCAGGGAT CGCGCTCGCG
CTGCACTTCG CTGCGTGGTT CGAGAGCCTC AACTGGACGA GCGTCGCTGC GAGCGTCACG
CTTGTTCAGG CGCAGCCGGT GTTCGTGGCG CTCGGGGCGT GGCTCCTGTT GCGCGAGCGC
GTGACGTCTC GGATGACCGT GGGCATCGCG GTGGCTGTCG CCGGAATGAT GGCGATGTCG
CTCGGCGATC TCCTTGGCGG CGTGCTGGTC GGACCGCGAC CGATCTACGG GAACGGACTG
GCACTGTTCG GCGCCATCAT GGCCGCTGGA TACGTGCTCG CTGGACGATC GATTCGCCAG
CGGGTCGCGC TGATCCCCTA CGTGGTGGTC GTGTACGGTG TCTGTACCCT CTCACTCCTC
GCGATCGTTC TCGCGGAGGG GCACGCATTA ACCGGGTATC CGCCGAGCGA ATGGGCGATC
TTTGTCGGCC TCGCCGTCGG ACCGGGGCTG TTGGGTCACA CCGTGCTCAA CTGGGCGCTC
GCGCACCTCA AATCGAGCGT CGTATCGGTG TCGTTGCTCG GCGAACCGGT CGGGGCAACG
ATTCTCGCGT TCGTGTTCCT CGCGGAGGCT CCCACGGCGT TCACGCTCGC CGGTGGCGCC
GTCGTTCTCG GTGGTATTGG TCTCACCGCA ACCGAAAGCA GAGCGTGA
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| Protein sequence | MSTNLRVSPA VGLVIAVTAV SGGAILVRLS DAPSSVAAFY RVLFTTLPLV PVALWRYRTQ
LAGITRQDLI FATLSGIALA LHFAAWFESL NWTSVAASVT LVQAQPVFVA LGAWLLLRER
VTSRMTVGIA VAVAGMMAMS LGDLLGGVLV GPRPIYGNGL ALFGAIMAAG YVLAGRSIRQ
RVALIPYVVV VYGVCTLSLL AIVLAEGHAL TGYPPSEWAI FVGLAVGPGL LGHTVLNWAL
AHLKSSVVSV SLLGEPVGAT ILAFVFLAEA PTAFTLAGGA VVLGGIGLTA TESRA
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