| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1426 |
|---|
| Symbol | |
|---|
| ID | 7400745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 1436460 |
|---|
| End bp | 1437524 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643708487 |
|---|
| Product | Succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_002566084 |
|---|
| Protein GI | 222479847 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CAGTTCCCGA CCCGAAGCCG TTCCGGTACG ACGCCGAGGT CGAGCCCGGT
GAGAAGCGAC GGATTCGGTA CGAGATCGGC GAGACGTATC TCGGCGACCC GATCGAGATA
CCGGTGACGA TCATCAACGG CGAGGCCGGC GGGCCGACCC TGTTCCTGAG CGCCGGGATC
CACGGGGACG AGCTCAACGG GGTCAAAGTC GTTCAAGAAG TCGCCGACCG GTACTCGCCC
GGAGACCTCC ACGGAACGCT GGTCTGTCTC CACGTGTGTA ACGTCCCCGC CTACGAGGCA
CAGCGGCGCG ACACCCCCAT CTACGACCAG GACATGAACC GGTCGTTCCC GGGGAAGGAG
CGCTCGAACA CCACCGAGCG AATGGCCAAC CGCATCTATC GACGATTCGT CGCGCAGTGC
GATCTCGGCC TCGACTTCCA CACGTCGACC CAGAATCGGA CGACGATCTA CCACGCCCGG
GCCGACCTCG ACAACCCCGA AGTCCGGCGA CTCGCGCGGG CGTACGCGAC GAACGTGGTG
CTGTACGGAT CCGGCGACGA GGGGTCGCTC CGGTCGACGG CGACCGCGGA CGGGATCCCG
ACCGTCACGG TCGAGATGGG GCGCGCACAC CGGTTCCAGC CGGTGCTCAT CGAGAAGGCG
TTGGAGGGGG TCGAGAGCGT CCTCGCCGAG TACGAGCTCA CGCCCGGCGA GGCGGTCCAC
TGGCCGGGGT GGTTCCAGTC GACCGCCGCC GACAGCACAA AGCGGTGGCT CCGCGCCGAC
ACCGGCGGAC TCGTCGAGAT GGAGTGGGGC CCCTACCCGC TCGTCTACGA GGGCGAGACG
ATCTGCACCA TCACGAACCA CTTCAAAACG GAGGAGCACG CGATCGAGGC CCCCTTCGAC
GGGCTGATCG TCGGGTCGCT GGAGAACCCG GTCGCCGCCC CCGGGCACCC GCTCTGTCAC
GTGGTCAAAC TCGACGCGGA GACGCGCCGG GAGATCGAAC GCGAGATCGA TAACGGGGAG
TTCGACGGCT ATCGCGCCCA CGGCGACGCC TGGGCCGACG ACTAA
|
|---|
| Protein sequence | MSDAVPDPKP FRYDAEVEPG EKRRIRYEIG ETYLGDPIEI PVTIINGEAG GPTLFLSAGI
HGDELNGVKV VQEVADRYSP GDLHGTLVCL HVCNVPAYEA QRRDTPIYDQ DMNRSFPGKE
RSNTTERMAN RIYRRFVAQC DLGLDFHTST QNRTTIYHAR ADLDNPEVRR LARAYATNVV
LYGSGDEGSL RSTATADGIP TVTVEMGRAH RFQPVLIEKA LEGVESVLAE YELTPGEAVH
WPGWFQSTAA DSTKRWLRAD TGGLVEMEWG PYPLVYEGET ICTITNHFKT EEHAIEAPFD
GLIVGSLENP VAAPGHPLCH VVKLDAETRR EIEREIDNGE FDGYRAHGDA WADD
|
|---|
| |