Gene Hlac_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1223 
Symbol 
ID7399491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1233256 
End bp1233645 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID643708288 
Producthypothetical protein 
Protein accessionYP_002565886 
Protein GI222479649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.442731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000021778 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCGAGG GTAACACCAG CGCATCTGTC GAGGAGGACG TGGAAGCGAA CGTCGAGACG 
GCGCTCCGCG AGTTCCTCGA CGCCCTCGGC GAGTCGGAGA CGTACCGGCG GTTCGTCGAG
GCCGATGAGG CGTTACAGGA CGACAGCGAC GCGATGGCGC TACTCCGCGA GTACCAGCGG
AAGCAACAGC AGATGCAACG CGGCGGCTTC GACGAGTCGG TGATGGCGGA GCTGAAACAG
CTCCAGACGG AGCTGTCCAG CAACGAGACG ATCCAGCGTC AGCAGGCCGC ACAGACAGAA
CTGGTCGAGG TCCTCCAGCG GACGAACGAC GCGGTCAGCG ACGAGATCGA CGAGGAGTTC
GCGCGATCAA CCGGGGGTGG TTGCTGTTGA
 
Protein sequence
MAEGNTSASV EEDVEANVET ALREFLDALG ESETYRRFVE ADEALQDDSD AMALLREYQR 
KQQQMQRGGF DESVMAELKQ LQTELSSNET IQRQQAAQTE LVEVLQRTND AVSDEIDEEF
ARSTGGGCC