Gene Hlac_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_1139 
Symbol 
ID7400948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp1145895 
End bp1146542 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID643708204 
ProductPHP domain protein 
Protein accessionYP_002565803 
Protein GI222479566 
COG category[R] General function prediction only 
COG ID[COG0613] Predicted metal-dependent phosphoesterases (PHP family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACAG TAGACCTCCA CGCCCACACA CGGTTTTTCC ACGGCTTCCA GGCGGAGCCG 
ACTCCCTACG ACCCGATCGG CGCGCGGCTG TTAGCGCTGT GGGGACGACG CGCTGGGCTC
GACGGCATCG CGCTGACCAA TCACGACTAC TACCGCCCAT TCGACAGCGC GACGGGAGGT
CCGCAGTTCA TCCCGGGTAT CGAAGTCACG ACGACGGCCG GCCACCTCTT GGTCGTCGGA
CCGGATCCGC CGCGTCGGAC GATTCCCGGT GAACGCACCC CGGAGGAGGT CGTGTCGCAG
GCGCACCGTA ACGGGTGTGC CGCGATCATC GCGCATCCGT ATCGACGGAG TCGCGTTCGC
GAGAGCGACG CGGAGTTCGA CGCCGTCGAA ATAAACGGGA AGCATCCCGA CAACGCCGAG
CGTGTCCGAG CACTCGCCGA ATCGCTTGAG ATACCGGTCG TCGGCGGGAG CGACGCCCAC
TATCCCTTCG AGGTCGGGCG GACGGTGACC CGAATCGAGG CGCCGGAACT CACGCCTGAA
GCCGTAGTCA CGGCGATTCG AGAGGGAGCA GTTGCGGTCG ACGTTCGCGA CTCACGGGTC
GACGAACTCA TGCGAACCGG GTACGAGTAC GTCCACCGGT ATCTGTGA
 
Protein sequence
MFTVDLHAHT RFFHGFQAEP TPYDPIGARL LALWGRRAGL DGIALTNHDY YRPFDSATGG 
PQFIPGIEVT TTAGHLLVVG PDPPRRTIPG ERTPEEVVSQ AHRNGCAAII AHPYRRSRVR
ESDAEFDAVE INGKHPDNAE RVRALAESLE IPVVGGSDAH YPFEVGRTVT RIEAPELTPE
AVVTAIREGA VAVDVRDSRV DELMRTGYEY VHRYL