Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1083 |
Symbol | |
ID | 7400155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 1082608 |
End bp | 1083816 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643708149 |
Product | Nucleotidyl transferase |
Protein accession | YP_002565748 |
Protein GI | 222479511 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR01208] glucose-1-phosphate thymidylylransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.39401 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGGAG TCGTGCTCGC GGCCGGCCGC GGGACCCGCA TGCGACCGCT AACGGACCGT CGTCCGAAGC CACTTCTTCC GGTCGGCGAT CGGTCGCTGC TCGAACGGGT GTTCGACACC GTGGCCGGTG TCGTCGACGA GTTCGTCGTC GTAGTCGGAT ACCGCGGCGA CGCGATCCGC GACGCGATCG GCGAGTCGTA TCGAGGCTAT CCGGTCCACT ACGTCGAGCA GGCGGAGGCG TTGGGGACCG CTCACGCCGT CGCGCAGGCC GAGCCCGTCG TCGACGAGGA CTTCCTCGTG CTCAACGGCG ACGTGGTCGT GGATGCATCG CTCCCCCGCT CCCTTGCCGA CGCCGACGGG ACGGCAGTCG CGGCCACGGA GGTCGTCGAT CCTCGGGCAT ACGGTGTGCT TTCGACGACT GAGGACGGCT CGCTCGCCGG GATCGTCGAG AAGCCCGACG ACCCGCCGAC GAATCTCGCG AACGTCGGCT GTTACGCGTT TCCGCCCGAG GTCTTCGAGT ATATCGATAG AACCCCCGAG AGCGAACGCG GCGAGTACGA GATCACGACG ACGATCGAGC TCCTCCTCGA CGACGGCCAT CCTATCGACG TGGCGCCCTA CGAGGGGACG TGGCTCGACG TCGGTCGTCC CTGGGAGCTG CTGAAAGCCA ACGAACTAGC GCTCACCGAG TTCACGGATG CCGTCGAGAA CGCTGGGACC GTCGAGGAAG GCGTCCACCT CCACGGCCCG ATCGTCATTG AGGAAGGAGC GCTGGTCCGG TCTGGAGCGT ATGTCGAGGG GCCGGCGCTG ATTCGCGAGG GCGCGGAAGT CGGGCCGAAC GCGTACGTTC GCGGGTCGAC GGTGGTCGGT CCGGACGTGC ACGTCGGACA CGGCGTCGAG GTGAAGAACT CGGTACTCAT GGCCGACGCG TCGGTCGGGC ACCTCTCGTA CGTCGGTGAC TCCGTGCTGG GTCGCGGCGT GAACTTCGGC GCCGGGACGA ACGTCGCGAA CCTCCGACAC GACGACGGGA ACGTCCGGAT GACCGTTAAA GGCGACCGCG TCGACACCGG CCGCCGGAAG CTCGGGGCGA TCGTCGGCGA CGGCGCGAAG ACGGGGATCA ACACGTCGCT GAACGCCGGC GTCAAACTGG GTGCAGCGGA GACGACCGGT CCCGGAGAGG TTCTGACTCG CGATCGAGTG TCGGAGTAG
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Protein sequence | MYGVVLAAGR GTRMRPLTDR RPKPLLPVGD RSLLERVFDT VAGVVDEFVV VVGYRGDAIR DAIGESYRGY PVHYVEQAEA LGTAHAVAQA EPVVDEDFLV LNGDVVVDAS LPRSLADADG TAVAATEVVD PRAYGVLSTT EDGSLAGIVE KPDDPPTNLA NVGCYAFPPE VFEYIDRTPE SERGEYEITT TIELLLDDGH PIDVAPYEGT WLDVGRPWEL LKANELALTE FTDAVENAGT VEEGVHLHGP IVIEEGALVR SGAYVEGPAL IREGAEVGPN AYVRGSTVVG PDVHVGHGVE VKNSVLMADA SVGHLSYVGD SVLGRGVNFG AGTNVANLRH DDGNVRMTVK GDRVDTGRRK LGAIVGDGAK TGINTSLNAG VKLGAAETTG PGEVLTRDRV SE
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