Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_1078 |
Symbol | |
ID | 7400150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 1077250 |
End bp | 1078446 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643708144 |
Product | orc1/cdc6 family replication initiation protein |
Protein accession | YP_002565743 |
Protein GI | 222479506 |
COG category | [L] Replication, recombination and repair [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1474] Cdc6-related protein, AAA superfamily ATPase |
TIGRFAM ID | [TIGR02928] orc1/cdc6 family replication initiation protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAG ATCTCTTTGC GGAGATGACT GAAACGCTCT TTGAGGACAA ATCTATTCTC TCGGAAGAGT ACCGTCCGGA CGTTATTGTC GAGCGGGATG ACGAGATCGA CGCGTATCGA TCGGCGTTAA AAGACGTTCT CTTCGGCCGA AATCCCGCAA ACGTGTTTAT TTACGGAAAA ACGGGTGTTG GAAAGACGGC CGTTACAGAG CACATGATGA GTGCCCTCCA AACGGAAGTG GAACGGCGCG ACGCAGCCGA GGAACTCCAT GTTCACTTCC GGAACTGCAA CGACGACAGC GTCTACAGAA CGGTTCGATC GCTGATAAAT AGTATCCGCG GAGATGAGGG AGAAACGTTT CCGGAAACCG GCCTCTCGAC GTCGCACGCT CTCGAAACCT TGTACGAGGA AATGGAGGAA CTCGGTGGCA CATTTCTGTT CATTCTCGAC GAAATCGACC ACCTGTCTGA CCCTGATACA CTACTGTACG AACTCCCGCG CGCACGAGCG AACGGGCATC TCGACGCTGC CCGAGTTGGT GTGATCGGGA TCAGCAACAA CTACACGTTC CGCTCGTCGC TGAGCCCGAA AGTCAAAGAC ACGCTGATGG AGAAGGAACT GGCCTTTTCG CCGTACGACG CAGACGAACT TCAGTCGATC CTCACTGCCA GAGCCGAGAA GGCGCTCGTT GACGGTGCAT CAGAAGACTC TGCGATCAGA CTCGCAGCCG CGAAGGCCGC GAAAGACACC GGAAGCGCAC GGCAGGCGAT AGACCTCCTT CGCGAGGGCG GTGATGTCGC TGAAGAACAG GGAGCGACGG CGATCACCGA CGACCACATC GAAGTGGCTG CCGCACGCGT TCAGCGAGGT CGCGTCCAAG ACAAGTTGCG TGACCAGACC ATGCACGGGC AACTCATCTT AGAGTCACTC GCACGGATCG AAGCGAGCGG AGACGTTCCT GCACGGTCGA AAGAGATTCA GGCGGTGTAC GAACGCGTCG CACGAAACTG GGGTCACGAT CCACTAACCA CGCTAAAGAG CATCCAGAAT CACCTCGCGG ATCTCACGAT GCTCGGGTTT CTCGAACGGA CCGAACAGAA CGAAGGGCGT GCGGGCGGCG TTCACTACCG ATACGAGCTC GCGTTGGACC CCGAAATCAT CTTGGAGACG CGCGAATCGA TCGAGAATCA GCCGTAG
|
Protein sequence | MSEDLFAEMT ETLFEDKSIL SEEYRPDVIV ERDDEIDAYR SALKDVLFGR NPANVFIYGK TGVGKTAVTE HMMSALQTEV ERRDAAEELH VHFRNCNDDS VYRTVRSLIN SIRGDEGETF PETGLSTSHA LETLYEEMEE LGGTFLFILD EIDHLSDPDT LLYELPRARA NGHLDAARVG VIGISNNYTF RSSLSPKVKD TLMEKELAFS PYDADELQSI LTARAEKALV DGASEDSAIR LAAAKAAKDT GSARQAIDLL REGGDVAEEQ GATAITDDHI EVAAARVQRG RVQDKLRDQT MHGQLILESL ARIEASGDVP ARSKEIQAVY ERVARNWGHD PLTTLKSIQN HLADLTMLGF LERTEQNEGR AGGVHYRYEL ALDPEIILET RESIENQP
|
| |