| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1041 |
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| Symbol | |
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| ID | 7400112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 1034162 |
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| End bp | 1035025 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643708108 |
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| Product | Pre-mRNA processing ribonucleoprotein, binding domain protein |
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| Protein accession | YP_002565708 |
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| Protein GI | 222479471 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CCGACGACAA CGCTGGCTGG TTCGCCGGCG ACGAGTCGGC GCTCCGCGCT
CGGATCGTCG ACGGCGAGGC CGACGAGCCG CGCGACTGGC CCGGTCTCGC GGTCGAGTCC
GGATTCGCCG ACTCGCGTGA CGACTACTAT GACCGCCTCC ACGAGACGTC CGTGGCGGCG
ACTCGCGAGG CGGTCCGCGA GCGCGAGCGC GCCGACGACC AGCAGCTCGT TCACGCGGTG
CGGGCGATGG ACGACTGCGA GCGTACCGCC AACGAACTGG CCGAGCGCGC CGCCGAGTGG
GCCGGGAGCC TCTTTGACGA CGCCGAGCCG GGGATCGAGG GCGCCCGTGC GGTGGCGGAC
CGCGAGCCGA CCGGCGAGCT AGAGCGGCGC GCCGTCTCGC TCGCGGCGCG GGTCGTCGAC
CTCGCCGCTG AGCGCGACGC GCTCGCCGAG ACGATCGACC GGATCGCGCC GGCGGTGGCG
CCGAACCTCG CCGAGATGGC CGGGGCCGAG CTCGCGGCGC GGCTGATCGC GCTCGCGGGC
GGGCTTGAGC CGCTCGCGAA GAAGCCCTCT GGAACCCTGC AGGTGCTCGG GGCGGAGGAC
GCGCTGTTTG CGCACCTTTC AGGACGCGCT CCCTCGCCGA AACACGGAAT CATCTACACC
CACGAGTACG TTCGGAACAC GCGACCCGAG GACCGGGGAT CGGCTTCGCG GGCACTCGCG
GGCAAGCTGA CGCTCGCGGC CCGGGTGGAC CACTACTCCG GGGAACGTCG CGAGACGCTC
CACGAGGAGC TCCGCGAGCG GATGGCGACG ATCCGGGCGC GTGCGAAGGA CGAGAGCGAC
GCCGCCGCGG AGGGTGACGC ATGA
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| Protein sequence | MTDTDDNAGW FAGDESALRA RIVDGEADEP RDWPGLAVES GFADSRDDYY DRLHETSVAA
TREAVRERER ADDQQLVHAV RAMDDCERTA NELAERAAEW AGSLFDDAEP GIEGARAVAD
REPTGELERR AVSLAARVVD LAAERDALAE TIDRIAPAVA PNLAEMAGAE LAARLIALAG
GLEPLAKKPS GTLQVLGAED ALFAHLSGRA PSPKHGIIYT HEYVRNTRPE DRGSASRALA
GKLTLAARVD HYSGERRETL HEELRERMAT IRARAKDESD AAAEGDA
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