| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_1004 |
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| Symbol | |
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| ID | 7401899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 999136 |
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| End bp | 1001901 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643708070 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_002565671 |
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| Protein GI | 222479434 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.627886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACC GAATCCGCGT GCTCCACGTC GACGACGACC CGGATCTCGC GGATATCACC
GCGTTGTTCC TCGAACGCGA GGATCCTCGA ATCACGGTCG AGACGGTCTC AAACGCCACC
GAAGGGCTCG AACGCCTCGA CGATCTCGAC CTCGACGCCA ATGTCGACTG TATCGTCTCC
GACCACGACA TGCCGGGACC GAACGGGATC GAGTTCCTGG AGGCGGTCCG GGAGCGCGAC
CCGGATCTCC CCTTCATCCT CTACACCGGG AAGGGGTCGG AGTCGGTCGC CAGCGAGGCC
ATCTCCGCGG GCGTGACGGA CTACCTCCAG AAGGGCGGCG GAACCGAGCA GTACGAGATT
CTGGCGAACC GCATCGTCGA CGCAGCCGAG AAGCGCCGGA TCGAGCGCGA GGCCGACCGG
ACACAGGCCC ACCTGCGGGC GATCACCGAT CACTCGATGG ACGCCATCCT CACCATCGAC
GGCGACAGCC GAATTCGGTT CGCGAACCCG GCCGTCGAGC GGCTGTTCGG CTACGCGCCC
GCGGAGGTCG AAGGCGAGCC GCTGGCAACG CTGATGCCGG AGCGGAAGCG CGAGGCGCAC
CGTGAGGCTG TCGAGCGGTA CTGCGCGACC GAGAAGCGCT CGATAGACTG GTCGGCGGCC
GAATTTCCCG GGAAGCACTG GGACGGCCGT GAGATCCCCC TGTCGATATC TTTCGGGGAG
TTCGAGGAGG ACGGCGAGCG ACGGTTCGTC GGCATCATCC GGGACGTGAC AGAACGCGAG
CGACACCGCG CGTTCGTCGA GCGCTCCAGC GACATCGTCA CCGCGCTCGA CGCGAACGGG
ACGTTCCAGT ACGCGAGCCC CTCGGTGGAG CGGATCCTCG GCCACGACCC GGCGGACCTG
GTCGGTGAGT ACGCCTTCGA GTACGTCCAC CCGGAAGACC GCGAGCGAGT CGTCGAGGTG
TTCGCGCAGT CGGTCACGGG CGACGAGCCG AACCCGACGG TGGAATACCG GCTCGCGGAT
GCGGACGGAG GGTACCTGTG GGTGGAGTCG GTCGGGAGTA ACCGCCTCGA CGACCACGGA
GTCAGCGGAT TCGTGATCAA CACACGCGAC ATCTCCGAGC GGAAGCAGCG CGAGGAGAAG
CTGTCGCGGC TCCGCGAGTG GACGCGGGAC CTCAATTACA CGCGAACAGT CGCGGAGACG
ACGCAGCTGG CCGTCGACGC CGCGGACGAA ATCGTCGGTG CGGGGCTGAG CGGGATCCAC
CTGGTGAACG AGGCGGGCGA TGCGCTCGAA CCCGCCGCGC TCGCCGAGTC GGTGCCGTCG
TTCTTCGACG AACAGCCCTC CTACGATCGG GACTCCCCGC CCGGGTCGCG CGCGGCCCTC
GCGTGGGACG CGTACAGCGG CGACGAGCCG CTCTCCGTCG GCGACCTGTC GGCGTACGAT
CGTCTCGACG AGGAGACGCC CGCCCAGAGC ATCGTGCTCC ATCCGATCGG CGACCACGGG
CTGTTCGTCA TCTCCTCGTC GGAGCCGCAC GCGTTCACCG AGACTGACGT GCTCATCGCG
GAGATCCTCG CGAACCATCT CGAAGCCGCG TTAGACCGGG TTGCTCGCGA GACCAGCTTA
GAGCGGCTCC ACGACGCGAC CCGAAGTCTC ATCCAGGCTG ACTCCCCGAA GGAGATCGCC
GAGCGCGTCG TCGAGGTGCT CGGGTTCTCC GTGGTCACCG TTCGGCTGTC TGACGAGGAC
GCCGGCGGGC TCGTCCCCGT CGCGGTCTCG GAGGGGGTCA AAGAGGTATT GCCCGTGCGG
AAGGTGTTCA CCCCTGACGG CGGGAGTCTC AACTGGGAGG CGTTCGAGGC GGGCGAACCC
CGGATGTACG ACGACATCGA GACGGCGGGC GCGCTCGACA CTGGAACGGG GCTCCGGAGC
CTGATGATCC TCCCCGTCGG CGAGCACGGA ACCATCTCTG TCGGCGAGAC CGAGCCCGGC
GTGTTCGACG GGACCGACGA GCATCTCGCA CAGATCCTCG CGACGGCAGC CGAGACGGCG
CTCAACGCGG CTGCGCGGAC CAGCCGTCTC CACGATCGGA GCGCGGAACT GGAGCGACAG
AACGATCGGC TCGCGGAGTT CGCCAGCGTC GTCTCTCACG ACCTCCGGAA CCCGCTGAAC
GTGGCGCAGG GACGGGTACA GCTGGCTCGC GACGAGTGTG ACAGTGAGAA CCTCGACGCC
GCCGCGCGCG CCCACGAGCG GATGGACACG CTGATCGCCG ACCTGCTCAC GCTCGCTCGC
GAGGGCGAGC GGGTGAGCGA GACGGAGTCG GTCCGGCTCT CGGTCGTCGT CGAGTCCTGC
TGGGAGACGG TCGAGACCGC GAATGCGACG CTGGCCGTCG AGGAGGACCT GTGGCTCCGG
GCCGACGAGA GCCGCTTCAG ACAGCTCGTC GAGAATCTGG TGCGGAACGC GGTCGAACAC
GGCGGCGACG ACGTGTTGAT CACTGTCGGC GCTCTCGGCG GGAACAGAAA CGGCAGCGAA
AACGGGTCCG TGACCGAGAC GAGCGACGAG GTCGGGTTCT TCGTCGAGGA CGACGGGCCC
GGGATCCCGG AAGCGAACCG CGACGAGGTG TTCGACGCCG GTTACTCGAC CTCGCGAGAG
GGGACCGGCT TCGGCCTCCG GATCGTCGAA CAGGTGGCGA CGGCCCACGG CTGGTCGGTC
CGGGTCACGG AGGGTCGCGA CGGGGGCGCC CGGTTCGAGG TGACGGGCGT GGAGCCGGCT
GAGTGA
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| Protein sequence | MGDRIRVLHV DDDPDLADIT ALFLEREDPR ITVETVSNAT EGLERLDDLD LDANVDCIVS
DHDMPGPNGI EFLEAVRERD PDLPFILYTG KGSESVASEA ISAGVTDYLQ KGGGTEQYEI
LANRIVDAAE KRRIEREADR TQAHLRAITD HSMDAILTID GDSRIRFANP AVERLFGYAP
AEVEGEPLAT LMPERKREAH REAVERYCAT EKRSIDWSAA EFPGKHWDGR EIPLSISFGE
FEEDGERRFV GIIRDVTERE RHRAFVERSS DIVTALDANG TFQYASPSVE RILGHDPADL
VGEYAFEYVH PEDRERVVEV FAQSVTGDEP NPTVEYRLAD ADGGYLWVES VGSNRLDDHG
VSGFVINTRD ISERKQREEK LSRLREWTRD LNYTRTVAET TQLAVDAADE IVGAGLSGIH
LVNEAGDALE PAALAESVPS FFDEQPSYDR DSPPGSRAAL AWDAYSGDEP LSVGDLSAYD
RLDEETPAQS IVLHPIGDHG LFVISSSEPH AFTETDVLIA EILANHLEAA LDRVARETSL
ERLHDATRSL IQADSPKEIA ERVVEVLGFS VVTVRLSDED AGGLVPVAVS EGVKEVLPVR
KVFTPDGGSL NWEAFEAGEP RMYDDIETAG ALDTGTGLRS LMILPVGEHG TISVGETEPG
VFDGTDEHLA QILATAAETA LNAAARTSRL HDRSAELERQ NDRLAEFASV VSHDLRNPLN
VAQGRVQLAR DECDSENLDA AARAHERMDT LIADLLTLAR EGERVSETES VRLSVVVESC
WETVETANAT LAVEEDLWLR ADESRFRQLV ENLVRNAVEH GGDDVLITVG ALGGNRNGSE
NGSVTETSDE VGFFVEDDGP GIPEANRDEV FDAGYSTSRE GTGFGLRIVE QVATAHGWSV
RVTEGRDGGA RFEVTGVEPA E
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