| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0835 |
|---|
| Symbol | gatA |
|---|
| ID | 7400801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 828400 |
|---|
| End bp | 829704 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707901 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_002565504 |
|---|
| Protein GI | 222479267 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.417948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.79256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCCG ACTACAACGC CTTCATCACG GAGGAAACAA TCGAGGGCGA CGACGACGCC
GACGGCCCCC TCGCTGGAGC GACGGTCGCG GTCAAGGATA ACATCTCCAC AGAGGGGATC
CGGACGACCT GCGGCTCCGA GATGCTCGCC GACTACGTCC CGCCGTACTC CGCGACTGTC
GTCGACCGGC TGACCGACGC GGGCGCGACG GTCGTCGGCA AGACGAACAT GGACGAGTTC
GGGATGGGAA CGACCACCGA GACCTCCGCG TTCGGCCCCA CGAAGAACCC TGCCGACCCG
GAGCGCGTCC CCGGCGGCTC CTCGGGCGGG TCGGCGGCGG CGGTCGCCGC GGGCGAGGCC
GACGTGGCCC TCGGCTCCGA CACGGGCGGG TCGGTGCGCT GTCCGGCCGC GTTCTGCGGC
GTCGTCGGGA TCAAGCCCAC CTACGGGCTC GTCTCGCGGT ACGGGCTCGT CGCGTACGCA
AACTCCCTCG AACAGATCGG ACCGATCGCG GGCACCGTCG AGGAGGCGGC CGCCGCCCTT
GACGTCATCG CTGGAGCGGA CCCGCACGAC GGGACCACTC GCGACTTGAG CGAGGTTGAG
GGTGCGAATC CCGACCCGAA CTACGCCGCG GCCGCCGACG GCGACGTCGA CGGGCTCACC
GTCGGGATCC CGACCGAGCT GTTCGACGGG GCCGACGAGC GCGTGGTCGA GACGGTCGAG
GCCGCGATCG CGGACCTTGA GGCGCAGGGC GCCGAAACGA CCGAAATCTC GCTGCCCTCG
GTCGAGCACG CGGTGCAGGC GTACTACGTC ATCGCGATGG CGGAGGCCTC CTCGAACCTC
GCGCGCTTCG ACGGCGTGCG ATACGGGAAC CGCGCCGAGT CGGACGGCAA CTGGAACGAG
TCGTTCGCGG AGACGCGCGA GGAGGGGTTC GGCGCGGAGG TCAAACGTCG GATCCTGCTG
GGCACGTACG CGCTCTCGGC GGGGTACCAT GACAAGTACT ACCAGAAGGC GCAGGATGCT
CGTGCGTGGG TCCGTCAGGA CTTCGAAGAC GCGTTCGCGG ACGTGGACGT GATCGCGTCG
CCGACGATGC CGGTGCTCCC CTTCGAGCTC GGCGAGAGCC TCGACGACCC CCTCCGGATG
TACCTCGCGG ACGCGAACAC GACGCCGGTG AACCTCGCGA ATCTCCCCGC GATTTCGGTG
CCCGCCGGCG AGGCCGACGG GCTTCCCGTC GGGCTCCAAC TGGTCGGCCC GAAATTCGAC
GAGGAGACGG TGATTCGCGC GGCGAGCGCG GTCGAGGACA GATGA
|
|---|
| Protein sequence | MAADYNAFIT EETIEGDDDA DGPLAGATVA VKDNISTEGI RTTCGSEMLA DYVPPYSATV
VDRLTDAGAT VVGKTNMDEF GMGTTTETSA FGPTKNPADP ERVPGGSSGG SAAAVAAGEA
DVALGSDTGG SVRCPAAFCG VVGIKPTYGL VSRYGLVAYA NSLEQIGPIA GTVEEAAAAL
DVIAGADPHD GTTRDLSEVE GANPDPNYAA AADGDVDGLT VGIPTELFDG ADERVVETVE
AAIADLEAQG AETTEISLPS VEHAVQAYYV IAMAEASSNL ARFDGVRYGN RAESDGNWNE
SFAETREEGF GAEVKRRILL GTYALSAGYH DKYYQKAQDA RAWVRQDFED AFADVDVIAS
PTMPVLPFEL GESLDDPLRM YLADANTTPV NLANLPAISV PAGEADGLPV GLQLVGPKFD
EETVIRAASA VEDR
|
|---|
| |