Gene Hlac_0709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0709 
Symbol 
ID7400182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp723046 
End bp723312 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content63% 
IMG OID643707775 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_002565381 
Protein GI222479144 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00373945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTATG CTACCATCGC GTTCGGGCTG TTCGCCGCGG TCACGCTGGC GTTCGGCCTC 
GGGGTCGTCC TGGCGCGCGA CGTGTTCCAC GCCGCGTTGC TTCTGGGCGG TGCCCTGACG
AGCGTTGCGG TGCACTACGT GATGCTGCAG GCGGAGTTTA TCGCCGCCAT GCAGATCCTC
GTCTACGTGG GCGGGGTCTT GATTCTCGTC ACGTTCGCCG TGATGCTCAC GCGATCGGAC
ACGGAAACGG AGGTGAATAG CGCATGA
 
Protein sequence
MVYATIAFGL FAAVTLAFGL GVVLARDVFH AALLLGGALT SVAVHYVMLQ AEFIAAMQIL 
VYVGGVLILV TFAVMLTRSD TETEVNSA