| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0671 |
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| Symbol | |
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| ID | 7401806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 687712 |
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| End bp | 688641 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643707737 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002565343 |
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| Protein GI | 222479106 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00498295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCACCC ACGCCGTCCC GTTCGAGAAG TACCACGGTA CGGGGAACGA CTTCCTCGTC
GTCGACGCGG ACGCTGAGGT CGTCGGCGAC CGCGCGGCCT TCGCGCGCAC CCACTGTGAC
CGCGAGACTG GTGTCGACGG GGGGGATTTC GACGCCGAGA GAAATGAGGA ATCCACCGGC
CGACGCGGCG CCGACGGCGT CCTCTTTCTC AGCGTCGAGG AGCGGTTCAA CCCCACCCGC
GTCGTGATGA CGCTGGTCCA GCCCGACGGC TCCACGGCGA CAATGTGCGG CAACGGCGCG
CGCGTCGTCG CGCTGTGGGC CCACGACCGG ACGGGCGACC GCGAGTTCAT GATCGACACG
CAGGCCGGTA CCCGACGCGC CTCCGTGAAC GCGGACGCGA CCGCGGCCAC CATCGAAATG
GGCGAGCCGA CGTTCGACCC TGCGCGCGTC CCCCTCGCCC GTGACGAGCC GCTGATCGAC
GAGCCGGTCG AGGGGCTAAC CGTTACCGCC GTCAACACCG GGGTCCCGCA CGCGGTGGCG
TTCGTCGACG GCGGTCGCAG CGACCCCGAC GGGATCGACT CGGTCGATCT CGACGCGGTC
GCGCCTCCCG TCCGTCACGC CGACGTGTTC CCCGAGGGCG CGAACGTAAA CCTCGCGAGC
GTCGTCGACG ACGGAAGTGG TGACGGTCCC GCCCTCATCG ACCAGCGCAC CTTCGAGCGC
GGCGTCGAGG GCGAGACCCG CTCTTGTGGT ACCGGCGCGG TCGCGGTCGT CGCGGCCGCG
CGACGACTCG GCCTGATCGA CGGCGAATCG GCCGTCAGCC GGCCGCCGGG CGGCGACCTC
GAAGTTACGG TACCGGACCG CGGCCACGCG ACCCTGACCG GTCCCGTCGC CCGCGAGTAC
GAGGGGACGC TCCCGGCCGA CCCGCGATGA
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| Protein sequence | MSTHAVPFEK YHGTGNDFLV VDADAEVVGD RAAFARTHCD RETGVDGGDF DAERNEESTG
RRGADGVLFL SVEERFNPTR VVMTLVQPDG STATMCGNGA RVVALWAHDR TGDREFMIDT
QAGTRRASVN ADATAATIEM GEPTFDPARV PLARDEPLID EPVEGLTVTA VNTGVPHAVA
FVDGGRSDPD GIDSVDLDAV APPVRHADVF PEGANVNLAS VVDDGSGDGP ALIDQRTFER
GVEGETRSCG TGAVAVVAAA RRLGLIDGES AVSRPPGGDL EVTVPDRGHA TLTGPVAREY
EGTLPADPR
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