Gene Hlac_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0621 
Symbol 
ID7401756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp639073 
End bp640101 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID643707687 
Productglycosyl transferase group 1 
Protein accessionYP_002565293 
Protein GI222479056 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.152612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGGAT GGGGGTATCC GCCGAACATC ACCGGCGGGC TCGATGTCCA CGTCGGTGAA 
CTGTTCTCCG GGCTCCGCGA CGACCTCGGG GTGGATGCCA CCCTCGTGTT GCCCGCGGAG
TTCGCGCCGG ACGACGAGCC CGGGATCGAG CCCGTCGAGA CCGGAGAGGG GGACGTCGCG
GACCGCGTCG ACCGCCTCAG CGACCGGTTT GCCGAGCTCG CCCCCGACCA CGACGTGATC
CACACGCACG ACTGGTTCGG GTACGGTCCC GGCCGACAGG CCGCTCGCGC GTCGGACGCG
ACGTGGGTGT CGTCGTTCCA CTCGCTCGCG AGCGACCGCA ATATCAACCC GCCGACCCGA
GAGGTCGAGA CCGAGCGCCG CCTCGCGAAC GCCGCGGACA CCAACATCGC GGTCAGTGAA
CTCGTCCGCG AGGACATCCG CGAGCTGTAC GGCGCCGACT CCCGAGTCGT GTACAACGGC
TTCTCGACCC CGACGTTCTC CGGGAAAGAC GTCCGCGAGG ACCTCGGGAT CGACGGGGAG
ATGGTCTTCT TCGTCGGCCG ACACACCGAC CAGAAGGGGA TCTCGCACCT GCTGTACGCG
ATGCGCAAGC TCCGCCGTCC CGGCGTGACC CTCGTCGTCG GCGGGTCGGG CCACCAGACC
GACCAGTTGA AGCGGTTTGT CGAGCTGCTC GGCATCGAAG AGCGTGTCGA GTTCGTCGGC
TACGTCCCGG AAGCAGAGCT CGGCGACTAC TACGCCGCCG CGGACGCGTT CGTCTCACCC
TCGTACGCGG AGCCGTTCGG CATCACGATC ACCGAGGCGC TGGAGTCCGG GACGCAGGTC
GTCGCGACCC GGGCGGGCGT CGCGGAGGTA CTGCCGGACG GCTGTCTCGT CGAGGTCGAG
GTCGATTCTG AGTCGATCGT CGACGGGATC GCAACCGCGC TTGACCGCGA GCAACCCCCG
GAGTACGAGC GCCGCGAGTG GTCGGAAGTC GCCGAGGACA CGCTGGCGGT GTACGAGGAC
GTAGCGTAG
 
Protein sequence
MLGWGYPPNI TGGLDVHVGE LFSGLRDDLG VDATLVLPAE FAPDDEPGIE PVETGEGDVA 
DRVDRLSDRF AELAPDHDVI HTHDWFGYGP GRQAARASDA TWVSSFHSLA SDRNINPPTR
EVETERRLAN AADTNIAVSE LVREDIRELY GADSRVVYNG FSTPTFSGKD VREDLGIDGE
MVFFVGRHTD QKGISHLLYA MRKLRRPGVT LVVGGSGHQT DQLKRFVELL GIEERVEFVG
YVPEAELGDY YAAADAFVSP SYAEPFGITI TEALESGTQV VATRAGVAEV LPDGCLVEVE
VDSESIVDGI ATALDREQPP EYERREWSEV AEDTLAVYED VA