| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0441 |
|---|
| Symbol | |
|---|
| ID | 7401059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 457256 |
|---|
| End bp | 457795 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643707505 |
|---|
| Product | protein of unknown function DUF82 |
|---|
| Protein accession | YP_002565113 |
|---|
| Protein GI | 222478876 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1656] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.297493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCG ACGACCGCGC GGCCGCCGAT GACGAACCCC CGCGCGTCCT CCTCGACGCG
ATGTGCGGGA AGCTCGCGAC GTATCTCCGG ATGTGCGGCT ACGACGCCGC CTACGCGCTC
GACCGCGGGG TCGAGGCGGA CGACCAGGTT CTGGCGCTGG CCGCGGCCGA GGCTCGGACC
CTGATCACCC GCGATCGCGA ACTCGCCGCC CGGACCGGGG ACGCGGTCCT CCTCACCGAG
CGCGACGTGC TCGACCAGCT TCGCGAGGTC GCCGCCGCGG GCTCCCCCGT CGCGCTCGTC
GACGAGCCGA CGCGCTGTGG CGCCTGTAAC GGGCGAGTCG ATCGGGTGTC GGCCTCGGAC
AGCGCCGACC CCGACGACCG CCCCGAGTAC GTGCCCGACG ACGTGGGGAC GGCGGGGGCG
CCCGAGTCCG AACCCGACAC CGCCGACACC CGCCCCGCGT GGCGCTGTCG CGACTGCGGG
CGCTGGTTCT GGAAGGGGAG CCACTGGGAG TCGATCGCGG AGCGACTCGA CGGGATCTGA
|
|---|
| Protein sequence | MPTDDRAAAD DEPPRVLLDA MCGKLATYLR MCGYDAAYAL DRGVEADDQV LALAAAEART
LITRDRELAA RTGDAVLLTE RDVLDQLREV AAAGSPVALV DEPTRCGACN GRVDRVSASD
SADPDDRPEY VPDDVGTAGA PESEPDTADT RPAWRCRDCG RWFWKGSHWE SIAERLDGI
|
|---|
| |