Gene Hlac_0421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0421 
Symbol 
ID7401039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp439826 
End bp440638 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID643707486 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002565094 
Protein GI222478857 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.130311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCT CGCTCGACGC TGACCAACTC GACCGGTACT CCAGACACGT GATCATGGAC 
GAGGTCGGCC CGGAGGGGCA AAAGCGCCTC CTCGACGGAC GCGCGCTCGT GGTCGGCGCC
GGCGGGCTCG GCGCGCCGGT CATCCAGTAC CTCGCGGCCG CGGGCGTCGG CACAATCGGG
ATCGTCGACG GCGACGTGGT CGAGCGCTCG AACCTCCAGC GGCAGGTGAT CCACGGCGAC
GCCGACGTGG GCGAGCCGAA GGTCGAGTCG GCGGCGCGGT ACGTCGACCG GCTCAATCCC
GACATCGACG TGGAGACGTA CGAGACGCGG CTCGACGAGG GGAACGTCCG CGACCTGCTC
GCCGGCTACG ACCTCGTCGT CGACTGCGCG GACAACTTCC GGACTCGATA CGTTGTCAAC
GACGCCGCCC GGATCGAGGG GCTTCCCGTG GTCCACGGCG CGATCTACAA GTTCGAGGGG
CAGGCGACGA CGCTCGTTCC CGACGGCCCC TGTTACCGGT GTCTGTTCCC GGAGGCGCCG
GAACCGGGGA CGGTGCCCGA CTGTGCGACG ACCGGCGTGC TCGGTGTGTT GCCTGGGACG
GTCGGGTGCA TTCAAGCCAC CGAGGCGATC AAACTCCTGC TCGACACGGG TGAGACGCTC
GACGGGCGCG TGCTCTTCTA CGACGCGATG GACATGACCT TCGAATCCGT GCCGTACCGG
CGCAACCCCG ACTGCCCGGT CTGTGGCGAC GACGGCATCG AGACGATCGA GGGGATCGAC
TACTCGGGCG GGTGTCGCGT CGACGCGGAC TGA
 
Protein sequence
MSLSLDADQL DRYSRHVIMD EVGPEGQKRL LDGRALVVGA GGLGAPVIQY LAAAGVGTIG 
IVDGDVVERS NLQRQVIHGD ADVGEPKVES AARYVDRLNP DIDVETYETR LDEGNVRDLL
AGYDLVVDCA DNFRTRYVVN DAARIEGLPV VHGAIYKFEG QATTLVPDGP CYRCLFPEAP
EPGTVPDCAT TGVLGVLPGT VGCIQATEAI KLLLDTGETL DGRVLFYDAM DMTFESVPYR
RNPDCPVCGD DGIETIEGID YSGGCRVDAD