Gene Hlac_0353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0353 
Symbol 
ID7399745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand- 
Start bp373250 
End bp374164 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID643707417 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002565027 
Protein GI222478790 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.733524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.170926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCG ACACGATCTG GAAGAACGGC GAGTACCTCG ACTGGGAGGA CGCGACCACG 
CACGTGCTGA CCCACGCGCT CCACTACGGG AGCGGCGTGT TCGAGGGCGT CCGCTGTTAC 
GACACCGAGC AGGGGCCAGC GATCTTCCGC TGGGAGGAAC ACCTCGACCG GCTGTTCGAC 
TCCGCGAAGA TGTACGACAT GGAGATCGAA TACTCCCGCG AGGAGATCAC CGAGGCCACC 
CTCGAACTCC TCGACCGGCA GGACCTCGAC TCCGCGTATA TCCGGCCGCT CGCCTACTTC 
GGCTACGACT CGCTCGGCGT CTCGCCGAAG GACTGCCCGA CCGACCTCGT GCTCGCGGCG 
TGGCCGTGGG GCGCGTACCT CGGTGAGGAG GCGTTAGAGG AGGGCGTCGA CGTGATGGTC 
TCCTCGTGGC GGAAACACGC CTCCTCGCAG GTGCCGACGA ACGTGAAGAC CACCGGCCTC 
TACGTCAACT CCATGCTCGC GGGCGAGGAG GCCCGCCGCA ACGGCTACGT CGAGGCCATC 
GTCCTGAACA AGGAGGGCAA CGTCGCCGAG GGGCCGGGCG AGAACATCTT CATGGTTAAC 
GACGGCGAGA TCTACACCAC CGGTCCCGCA CAGTCGATCC TCGAAGGGAT CACCCGCGAC 
ACCGTCATCG AACTGGCGAA GGAGCGCGGC TACACCGTCC ACGACGAGGC GGTCATCTCC 
CGCGGACAGC TGTACACCGC CGACGAGCTG TTCTTCACCG GCTCCGCCGT CGAGGTGACT 
CCGATCCGCT CCGTCGATGA CACCGAGATC GGCTCGGGCA CTTGCGGCCC GGTCACCGAG 
GAACTCCAAA GCGCCTTCTT CGACCTCGTG GAGCGGCGAA CCGACGCCCA CGACGACTGG 
TTCACGTACC TGTAG
 
Protein sequence
MDVDTIWKNG EYLDWEDATT HVLTHALHYG SGVFEGVRCY DTEQGPAIFR WEEHLDRLFD 
SAKMYDMEIE YSREEITEAT LELLDRQDLD SAYIRPLAYF GYDSLGVSPK DCPTDLVLAA 
WPWGAYLGEE ALEEGVDVMV SSWRKHASSQ VPTNVKTTGL YVNSMLAGEE ARRNGYVEAI 
VLNKEGNVAE GPGENIFMVN DGEIYTTGPA QSILEGITRD TVIELAKERG YTVHDEAVIS 
RGQLYTADEL FFTGSAVEVT PIRSVDDTEI GSGTCGPVTE ELQSAFFDLV ERRTDAHDDW 
FTYL