Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0334 |
Symbol | |
ID | 7399724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 357302 |
End bp | 357850 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643707396 |
Product | archaemetzincin-like protein |
Protein accession | YP_002565008 |
Protein GI | 222478771 |
COG category | [R] General function prediction only |
COG ID | [COG1913] Predicted Zn-dependent proteases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.567826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0385783 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGCGG CGGTCAAAAG CTGTTCCATG CTCGTGGACA TCGTCCCAGT CGGGGAGGTC ACCCCCCGCG TGAAACGCGA GGCCTCCGCC GCGCTCCGTT CGGTATACGA CTGCGACGTG ACCGTCCACG ACGATCAGCC GATCCCCGGG ACGGCCTACG ACGAAGGCCG CGATCAGTAC CGCGCCGAGG ACCTCATCGA AACGGTCGGC CGCGTCGGCG GCGGCGAAAA GAATATCGGG ATCACTCCGC GCGACCTCTA CTACCGCCGT CGGAACTACG TGTTTGGGCT CGCCTACCTC AACGGTAACG GCTCCGTGAT TTCGACCCAC CGGCTTCGCA CCTCCTCCGA CGGGGGCGTC TCGACCAAGC CCGCGGTCGA CGTGTTCGCC GACCGCGTCC GCAAGGAGGT CGTCCACGAG ATTGGCCACA CGCTCGGACT AGAGCACTGC GACAACAGCA AGTGCGTCAT GTCCTTCTCG CCGACCGTTC GCGAGGTCGA CGTGAAAGAG GAGAACCTCT GTGGAACCTG TTCGCGACTC GTGCGGTAG
|
Protein sequence | MIAAVKSCSM LVDIVPVGEV TPRVKREASA ALRSVYDCDV TVHDDQPIPG TAYDEGRDQY RAEDLIETVG RVGGGEKNIG ITPRDLYYRR RNYVFGLAYL NGNGSVISTH RLRTSSDGGV STKPAVDVFA DRVRKEVVHE IGHTLGLEHC DNSKCVMSFS PTVREVDVKE ENLCGTCSRL VR
|
| |