Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0326 |
Symbol | |
ID | 7399716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 350681 |
End bp | 351760 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643707388 |
Product | ABC transporter related |
Protein accession | YP_002565000 |
Protein GI | 222478763 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.516533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00902644 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAACGAGA CTACGGCCGC GGACGTCGAC GCGGCCGACG ACGCGACGCG GGGGCGCGAC GCCGCCGGTG CCGACGCCGC CGATCCCGAC GCGGTCGTCG TCGGCGAAGG CGTCCGCAAG TCGTACGGCG ACGTCGTCGC GCTCGACGGC GTCGACATCC GGGTCGAGTC CGGCGAGGTG TTCGGACTCA TCGGCCCAAA CGGCGCGGGG AAGACGACGC TGGTCCGCGC GCTGACGGGG ACGACCGAGG CCGAGGGCGA CCTGCGGGTG TTCGGTGTCC CGCCGCGCGA GGTCGACCCG CAGCGGATCG GGCTGCTCCC GCAGTCGTTC GACCCGCCGG AGCGGCTCAC GGCGACCGAA CTGGTCGGCT ACTACGGCGG GCTCTACGAC GCGGCGCGCG ACGCCGAGTC CGTCCTGCGG GACGTGGGGA TGGCCGACGA CGCGGACGTG TGGTACGAGA CGCTCTCGGG CGGGCAGAAG CGCCGGACCT GCGTCGCCAC CGCCATCGTC AACGACCCCG ACCTCCTCTT CCTTGACGAG CCGACCACGG GGATCGACCC GGCCGGCCGG CGATCGATCC ACCGATTGAT AGAGCGACTC GCGGGCGGCG GAACGACCGT CTTCCTCACG AGTCACGCGA TGGACGAGGT CGAGCGGCTG GCCGACCGCG TCGCGCTCCT CCGGGACGGG AAAATCGTCG CTGTCGGCGC TCCCGAGGAA CTGATCGCCG ATCACGGAGG CGAGCCGCGC TTGGAGGTCA AGCTGGACGG TCCCGCGTCC GAGGCGGACT GCGAGGCGGT TCAGGAAGCG ATCCGGGAGG CGCTCTCGGA CGAATCGGCG GGGGAGAGCG AGGACGCGCC CGCGGTCGAG TCCACCCGCA AGGGCCTCCG GATCGGGGGC GTCCGACCCG AGGGGATCGG AGACGCCGTC GACGCACTGG AGACGGCCGA GATCGACTTC GAGTCGCTCG CGTGGTCCGA GCCCTCGTTG GAAGACGTGT ACCTCCGGCT CACGGGCGAA GAGTACTCGC CGCGGTCGGA GCCGCTTGAC GAGGTCGCAC CCGACGGAGG CGACCGATGA
|
Protein sequence | MNETTAADVD AADDATRGRD AAGADAADPD AVVVGEGVRK SYGDVVALDG VDIRVESGEV FGLIGPNGAG KTTLVRALTG TTEAEGDLRV FGVPPREVDP QRIGLLPQSF DPPERLTATE LVGYYGGLYD AARDAESVLR DVGMADDADV WYETLSGGQK RRTCVATAIV NDPDLLFLDE PTTGIDPAGR RSIHRLIERL AGGGTTVFLT SHAMDEVERL ADRVALLRDG KIVAVGAPEE LIADHGGEPR LEVKLDGPAS EADCEAVQEA IREALSDESA GESEDAPAVE STRKGLRIGG VRPEGIGDAV DALETAEIDF ESLAWSEPSL EDVYLRLTGE EYSPRSEPLD EVAPDGGDR
|
| |