Gene Hlac_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0325 
Symbol 
ID7399715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp347904 
End bp350540 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content73% 
IMG OID643707387 
Productdihydropteroate synthase 
Protein accessionYP_002564999 
Protein GI222478762 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01496] dihydropteroate synthase
[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.899871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0161218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTACC ACGAGGCGGC GGCGTTCCTC TTCGACCTCC GCCGTTTCTC GGTGAAGCCG 
GGGACCGAGC GCGTGGCGGC CCTCCTCGAT CAGGTCGGGA ACCCGGAAGA AGACGTGTCG
TTCGTGCAGG TCGCGGGCTC GAACGGGAAG GGAAGCACCG CGCGCATGAC CGAGTCGATC
CTGCGTGAGG CCGGGCTCTC CGTCGGCCTC TACACCTCGC CGCACCTCTC CGCGCTCGCC
GATCGGGTCC GGGTCGACGG GCTGGCGATG ACCGAAGCGG CGATCGCCGA CTTCGTCGAG
GAGGTGAAGC CGTGGCTCGT CGAACGCGCT GCCAACGGCG AACCCCTCAC CTTCTTCGAG
GTCGTGACGG CGATGGCGAT CCACGACTTC GCGCGCCGCG AGGTCGACGT GGCCGTCTTG
GAGGTCGGAC TCGGCGGCGA GTACGACGCC ACCAGCGCGG TCGACCCCGT CGCGACCGCG
GTCACCAACG TCTCGCTCGA ACACACCGCG GTCCTCGGCG ACACGATCGC GGAGATCGCC
CGCACCAAAG CGCGGATCGC CGACGCGGGC GTTCCTCTCG TCACCGCCTG TGAGGGCGAG
GCCCTGTCGG TCGTTCGCGA GGTCGCCAAC GACGCGGGCG CCCCGATCGC GACGGTCGCG
AGGGCGAGTG GCAGTAGCGG GAACGGCGAG ACCGACGACC AGACCCTCTC CGTCGCCTAC
GAGGGCCGCG TGAGCCCGAC CGACGCCGAG GTGACGCTGG CCGGCGAGGT AGACGGGACC
TACCGGATCC CGCTGGTCGG CGACCACCAG GCGACGAACG CGGGAATCGC GGTCGCGCTG
GCCCGACGCA CCGCGGGCGC CCTCGGGAAC GGAACCGACG CCTCCCTCCC CGACGAAGCG
GTCCGCGACG GCCTCGCGCG GGCGACGTGG CCCGGTCGGT TCGAGGTGGT CGACACCGCC
CCGCTGACGG TGCTCGACGG CGCGCACAAC CCGGCGGCCT GCCGAACGCT CGCGGGGACC
CTCGCCGAGT ACGACTACGA CGACCTCCAC CTCGTGTACG GCGCCATGCA CGACAAGGAC
CACGTGGGCG CCGCGAGCGC GCTCCCCGAC GCCGACTCTG CGGTCACCTG TCGCCCGGAC
CTCGACCGCG CGGAGGACCC CGAGGTGTTG GCCGCCGCGC TTCGGACCGC TGGCGTCGAC
GACGTGACCG CCGGCGACGA CGTGGCCGCC GCGCTCGAGA CCGCAGTCGA ACGCGCCGAC
CTCGGCGACT GCGTGCTGCT CGTCGGCTCG CTGTTCGCGG TCGCGGAGGC CCGCGCGGCG
CGCATGCGGA CCGTGACCCC TCGGACCGTC AGCGGGAGCG ACCCGGACGC GAACGCAGCG
CGCGCGCTGG ACATCGGCGG CGTCCCAACC GGCGACGAAT CCGGCGCGAG CCGACGGCGA
CGCGAGGGGA TCGACCACCG CGTCCTCTCC CTCCGACTGC GCGGCGACCG CGCGGAGCGC
CTCACGGCCG CCCTCCGCGA GGCCGGCGGC GACGCCGCGA TCGGGGGCCT CGGCGCCGGC
GAGGGTCGCG TCCCGGGCGG CGAGTACGTC CCCGTCACGC TCGCGGGAAC GGTGGGGGAG
TACCGCGAGC TGCTCGGCCG GCTCCGCGAG CGCGAGGGTG AGGAGTTCGC GGGGATCGCA
GGCGACATCG CGGACCGGGT CGGGATCGAC GATTCCGACG CCGCCGACTC CGCCCCCGAC
GACTACCCCT GGATCGACGG TACCGCGATC ATGGGCGTGC TCAACGTCAC GCCGGACTCC
TTCCACGACG GGGGGAGACA CGCGGGCCCC GACGACGCGG TCGCGGGCGT CGAGCGCATG
GTCGAGGCGG GCGTCGATGT CGTGGATGTC GGCGGCGAGT CGACTCGGCC GGGCGCCGAG
CCCGTGCCGG TCGACGAGGA GATCGACCGG GTCGTCCCGA CGCTTGAGGC GATCCAATCA
GTGCCGGCGG TCGCCGACAG CAACGTGCTA ATCTCGGTGG ATACGCGGAA GCCAGCCGTC
GCGGCGGCTG CGCTCGACGC CGGCGCCGAC ATCATCAACG ACGTGACCGG GCTGGCGGAC
CCGGAGATGC GGGAGGTCGT CGCCGACGCC GGCTGCCCGG TCGTGGTGAT GCATAGCCTC
GACGCGCCTG TCGACCCGAC AAACGACCCC GAGTACGACG ACGTGGTCGA CGACGTGATC
GCGGCCCTTC GCGAGCGACT CGCGCTGGCC GAGACCGCCG GGATCGACCG AGAGAAGGTA
ATCGTCGACC CCGGGCTCGG CTTCGGTAAG TCGGCCACCG AGGCGTTCGA TCTGATCGAC
CGCGTCGGGG AGTTCGCCGC GCTCGACTGT CCGGTGTTGA TCGGTCACTC CCACAAGTCG
ATGTACGGCG CGGTCGGCCG AGGGGAAGAC GACCGCGAGC ACGCCACCGT CGCCGCGACC
GCGCTCGCCG CCGACCGCGG TGCCGACATC GTTCGGGCCC ACGACATCGC CGAGAACCGC
GCCGCGGTCG ACGTCGCCGC CGCGGTGAAC GGGTCCCTTC GCGAGCGCGG GGGCGCCGAC
GAGAACGGCG ACGGCGACCC CGAGGGGGGC GCCAAGGGGA ACGCCGCCGG CGAATGA
 
Protein sequence
MHYHEAAAFL FDLRRFSVKP GTERVAALLD QVGNPEEDVS FVQVAGSNGK GSTARMTESI 
LREAGLSVGL YTSPHLSALA DRVRVDGLAM TEAAIADFVE EVKPWLVERA ANGEPLTFFE
VVTAMAIHDF ARREVDVAVL EVGLGGEYDA TSAVDPVATA VTNVSLEHTA VLGDTIAEIA
RTKARIADAG VPLVTACEGE ALSVVREVAN DAGAPIATVA RASGSSGNGE TDDQTLSVAY
EGRVSPTDAE VTLAGEVDGT YRIPLVGDHQ ATNAGIAVAL ARRTAGALGN GTDASLPDEA
VRDGLARATW PGRFEVVDTA PLTVLDGAHN PAACRTLAGT LAEYDYDDLH LVYGAMHDKD
HVGAASALPD ADSAVTCRPD LDRAEDPEVL AAALRTAGVD DVTAGDDVAA ALETAVERAD
LGDCVLLVGS LFAVAEARAA RMRTVTPRTV SGSDPDANAA RALDIGGVPT GDESGASRRR
REGIDHRVLS LRLRGDRAER LTAALREAGG DAAIGGLGAG EGRVPGGEYV PVTLAGTVGE
YRELLGRLRE REGEEFAGIA GDIADRVGID DSDAADSAPD DYPWIDGTAI MGVLNVTPDS
FHDGGRHAGP DDAVAGVERM VEAGVDVVDV GGESTRPGAE PVPVDEEIDR VVPTLEAIQS
VPAVADSNVL ISVDTRKPAV AAAALDAGAD IINDVTGLAD PEMREVVADA GCPVVVMHSL
DAPVDPTNDP EYDDVVDDVI AALRERLALA ETAGIDREKV IVDPGLGFGK SATEAFDLID
RVGEFAALDC PVLIGHSHKS MYGAVGRGED DREHATVAAT ALAADRGADI VRAHDIAENR
AAVDVAAAVN GSLRERGGAD ENGDGDPEGG AKGNAAGE