Gene Hlac_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0316 
Symbol 
ID7399706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp337472 
End bp338533 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content71% 
IMG OID643707378 
ProductDRTGG domain protein 
Protein accessionYP_002564990 
Protein GI222478753 
COG category[R] General function prediction only 
COG ID[COG0857] BioD-like N-terminal domain of phosphotransacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.203818 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATA CACCCACGAC ACTCGTCACC GCGACCGGAG AAGGCGCCGG AAAGACAGCG 
ATCACCGTCG CGCTCGCGCG GCTCGCCGCC GACCGCGACC GCAGCGTCGG CTATATGAAG
CCGAAGGGGA CGCGACTCCA GTCGAACGTC GGCAAAACGC TCGATCAGGA CCCCATGCTC
GCCCGCGAGG TGCTCGGCCT CGACGCCGAG ATGCACCAGA TGGAGCCCAT CGTCTACTCG
CCGACATTCG TCGAGGGCGC GATCCGCGGC ACCGAGGATG CGGACGCGCT CCGCGACCGG
ATCCGCGAGG AGTTCGATGA ACTGGCCGCC GACCGCGACC AGATGTTCGT GGAGGGCGGC
GGCCGCTGGA CCACCGGCGG CGTCGTCGAC CTCACCGATG TCGACGTGGC GGAGCTGCTC
GACGCGCGGG TCGTGCTGGT CGCCGGGTAC GACTCGCCGA ACGACCTCGA CGAGGTGCTG
GCGGCAGCCG ACGCGTTCGG CGACCGGCTC GCCGGCGTCG TGTTCAACAA GGTCTCCGAC
GACGCGTTCG AGTCGCTCGA TCAGGACGGG ATCCCGTTCC TCGAATCGAA GGGGATCACC
GTCTTCGGCG CGATCCCGTC CGAGAAGGAG CTAGCTGGCG TCACCGTCGG TGAGCTCGCC
GACGAACTCG GCGCGGAACT CCTGACGGAC GCCCCAACCG ACGGCTTCGT CGAGCGCTTC
CTGGTGGGCG CGATGGGCGG CGACGAGGCG CTCCGCTACT TCCGGCGCGC CCGCGACGCC
GCCGTCATCA CCGGCGGCGA CCGCGCCGAC GTCCAGACCG CGGCGCTCGA GGCCTCCGGC
GTCGCGTGCC TCGTGTTGAC CGGCGGTCAC CGCCCCTCGG GCGCCGTACT CGGAAAGGCC
GCCGACGCCG GCAAGCCCGT CCTCGCGGTG AACACCGATA CGGTCACCGC GATTGACCGC
GCCGAGGGGG TCGTCCGCGG CGGGCGGACC CGCGACGCGC GCACCGTCGA GCGGATGGCG
GAGCTGCTCG CCGCCCACGT CGACGTGGAC GCGTTAGTCT GA
 
Protein sequence
MTDTPTTLVT ATGEGAGKTA ITVALARLAA DRDRSVGYMK PKGTRLQSNV GKTLDQDPML 
AREVLGLDAE MHQMEPIVYS PTFVEGAIRG TEDADALRDR IREEFDELAA DRDQMFVEGG
GRWTTGGVVD LTDVDVAELL DARVVLVAGY DSPNDLDEVL AAADAFGDRL AGVVFNKVSD
DAFESLDQDG IPFLESKGIT VFGAIPSEKE LAGVTVGELA DELGAELLTD APTDGFVERF
LVGAMGGDEA LRYFRRARDA AVITGGDRAD VQTAALEASG VACLVLTGGH RPSGAVLGKA
ADAGKPVLAV NTDTVTAIDR AEGVVRGGRT RDARTVERMA ELLAAHVDVD ALV