| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0279 |
|---|
| Symbol | |
|---|
| ID | 7401205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 302282 |
|---|
| End bp | 303328 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643707342 |
|---|
| Product | V-type ATP synthase subunit C |
|---|
| Protein accession | YP_002564954 |
|---|
| Protein GI | 222478717 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1527] Archaeal/vacuolar-type H+-ATPase subunit C |
|---|
| TIGRFAM ID | [TIGR02923] ATP synthase A1, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.6298 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG TCGGGAGCTC GAACCCAGAG TACGTCGTCG CGCGGGTTCG TGCCCGCCGC
GGCAGCCTCT ACGGGGACGA GGAGTACCGG AAGCTGACCC GGATGGGCCC GGCGGAGATC
GCCCGGTTCA TGGAGGAGTC GAGCTACGGC ACGGAGATCA ACGCCCTCGG GAGTCTTCAC
GGCGGCGTGG ACCTGATCGA GTACGCGTTA AATCGGAACC TCGCTGGGCA GTTCGACGAT
ATTCTCGACT GGAGCGAAGG GTCGCTGTAC GGCCTGATCG CTCGGTACCT CCGTAAGTTC
GACGCCTGGA ACGTGAAGAC GGTTATTCGC GGCGTCTACA CGGACGCAGA TCAGTCGGAA
ATCGAGGTCG ACCTGATCCG CGCCGGCGAG TTCGACGACC GGCGGATCCG TCGGCTGCTT
GAAGCCGACT CGATCGACGC AGTCGTCGAA GTGCTCGAAG ACACTATCTA CGGAGACCCG
CTGCGAGAGG CGTACGCTGA GTACGAGGAG ACGGGCGTGC TGGTGCCTCT CGAAAACGCC
GTCGACCGTG CGTTCTACGA GCGGCTCCTG TCGGGGCTCG GCAACGACGA GCCGACCCGC
CAGTACGAGG CGTTCCTCAA AGCGGAGGTC GACTTCCGAA ACGCGGCGAA CGCCCTCCGG
CTCGCCCGGT CGGGCGCGGA TATCGACCCC GCAGCGTACT TCATCGAGGG CGGCGAGCTG
TTCACTCGCG GGTCGCTCGC GCGACTCGCG CGGAACCTCG ACGAACTCGT GGAGTATATC
GCGGACAGCC AGTACGGTGA CGAGCTCGGA CCCGCGTTGC GCGAACTCGA GGAGGCGAAC
AGCCTCATCG CGTTCGAACA CGCGACCGAC GCCGCCTTGC TGGCGTACGG CGACCAGCTC
GGCACGATCC ACCCGGTATC GGTGACCCCG GTGATCTCGT ACATCCTCGC GAAGGAGCGC
GAAGTCGAGA ACATCCGGGC GATCGCCCGC GGAAAGGAGG CCGGCCTGTC GGCCGACGAG
ATCGAATCGG AGCTGGTGAT AACATGA
|
|---|
| Protein sequence | MSAVGSSNPE YVVARVRARR GSLYGDEEYR KLTRMGPAEI ARFMEESSYG TEINALGSLH
GGVDLIEYAL NRNLAGQFDD ILDWSEGSLY GLIARYLRKF DAWNVKTVIR GVYTDADQSE
IEVDLIRAGE FDDRRIRRLL EADSIDAVVE VLEDTIYGDP LREAYAEYEE TGVLVPLENA
VDRAFYERLL SGLGNDEPTR QYEAFLKAEV DFRNAANALR LARSGADIDP AAYFIEGGEL
FTRGSLARLA RNLDELVEYI ADSQYGDELG PALRELEEAN SLIAFEHATD AALLAYGDQL
GTIHPVSVTP VISYILAKER EVENIRAIAR GKEAGLSADE IESELVIT
|
|---|
| |