Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0251 |
Symbol | |
ID | 7401177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 271562 |
End bp | 272581 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707314 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002564926 |
Protein GI | 222478689 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTAG GACGGTTCCT CCTGAAACGC GGGATCCAAG GCGTGCTGGT CGTGTGGGGG GTCGTGACCG CGGTGTTCCT GCTGCGGTTC ATCACCCCCG GCAACCCAGT GACGTTCGTC GCACCGCTGG ACGCGAGCGC GGAGCTTCGC GCGCAGATAG CCGCAGATCT GGGGCTCGAT CAGCCGCTGT ACATCCAGTA CGTCGACTAT ATCGGCGGGC TCCTACAGGG AGACATGGGG TACTCGTACC TCCGCGGGAC TGAGGCGAGC ACCATCGTGT TCGCCCGCGT GCCGGCCACC GTCGAGCTGG CGGTCGCGGC GACCATCGTT GCGATCGTCA TCGCGATCCC GCTCGGCGTC ATCAGCGCGA CGCGCCGGCG CGAGCCCGCC GACTACGGGG CGACCCTGTT CTCGCTCGTG GGCATCTCGA CACCGAACTT CTGGCTCGGG ATCATGCTCA TCCTGGTGTT GTCGGTGCAG TTCGATCTGT TCCCGACGAG CCGGCGGCCG ATCGGTTTCT TCGAGACGTT CACGTTCCTC GTCACGGTCG AGAACGGACT CTCCGTCCCG ATGAACGTCG GCGCGTTCCT CGACGGACTG CGGACGTGGC TGTGGCACAT CACACTGCCG GCGGTGACGC TCGGCACGTA CTTCACCGCG CTCGTCACCC GGCTCACCCG GAGCGGGATG ATCGAGGAGC TCGGACAGCC GTACGTCCGC GCGGCGCGTG CGAAGGGGCT CCCGGAGTCG CTGATACAGT ACAAACACGC GCTCCAGAAC ACCCTCATCC CGATTGTCAC CGTGTTGGGA CTCCAGCTCG GGACCCTGAT CGGCGGCGCA GTGATCACCG AGGCCGTGTT CTCGTGGCCC GGGCTCGGCA CGCTCGTCAT CGATGCGATC AACGTCCGCG ACTGGCCGCT GATCCAGGGG TCGCTGATCG TGATCGGGAC CGGGTTCGTG CTGATCAACA TCTTCGTCGA CTCGCTGTAC GCGTACCTCA ATCCGCGGGT GGTCCACTGA
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Protein sequence | MALGRFLLKR GIQGVLVVWG VVTAVFLLRF ITPGNPVTFV APLDASAELR AQIAADLGLD QPLYIQYVDY IGGLLQGDMG YSYLRGTEAS TIVFARVPAT VELAVAATIV AIVIAIPLGV ISATRRREPA DYGATLFSLV GISTPNFWLG IMLILVLSVQ FDLFPTSRRP IGFFETFTFL VTVENGLSVP MNVGAFLDGL RTWLWHITLP AVTLGTYFTA LVTRLTRSGM IEELGQPYVR AARAKGLPES LIQYKHALQN TLIPIVTVLG LQLGTLIGGA VITEAVFSWP GLGTLVIDAI NVRDWPLIQG SLIVIGTGFV LINIFVDSLY AYLNPRVVH
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