| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0232 |
|---|
| Symbol | |
|---|
| ID | 7402161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 251421 |
|---|
| End bp | 252425 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 643707295 |
|---|
| Product | cobalamin biosynthesis protein CobD |
|---|
| Protein accession | YP_002564907 |
|---|
| Protein GI | 222478670 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
|---|
| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.700118 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.268973 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACTG CTCCCCTCCT TACCCCCGTA CTCGCCTCCC TCGCCACGCT GGCGATCGCG
GTCGCCCTCG ACCTCGCGCT CGCGGAGCCA CCCGCCCGAG TCCACCCCGT CGCGCTGTTC
GGGTCGGTCG TCGGTCGGTT CGACCGCTCG TGGTCGCGCC CCCGGCTCGT CGGCGTCGCG
GTCGCGGTCG GGCTCCCGAT CGGTGTCGCG GCGTTTGCGG GCGGGATCGT CGCAGCCGCC
TCCTTCGCTC TTCCCGCCTT CTCCGCCCTC CCCGTTCTCG TCGCCGGAAC GATCCTCTTC
ACGACCGTCA GCCTCCGAAT GCTGCTGGCG ACGACCGCCG AGGTCGTCGA ACTGACGGAA
ACGGATCCGG ACGCGGCCCG GGAATCGGTG CGCGCGCTCG CGGGCCGGGA CGCGACCGAC
CTCTCCCCGG CCGACCTCCG GAGCGCGGCC GTCGAGAGCG CGGCCGAGAA CCTCGCCGAC
GGGTTCGTCG CGCCCCTCGG CGGGTTCGCG CTCGGAGCGA CGGTCGGACT CGCGGTCGGC
GGTTCCGAAG TCGCGCTCCC GCTTGCCGCG GGGGTTGCCG CCGCGGTCTG GGTGAAGGCC
GTCAACACGC TCGACTCGAT GCTCGGCTAC CGCTCGAAGC CGGTCGGGTG GGCGAGCGCT
CGGCTCGACG ACGCCGTGAT GTTCCTCCCG GCCCGCGTGA CCGCCGGCTG TCTTTCGGTC
GCGGCCGGAT CGATCGAAGC CCTCCGCTGG GCCGCATCGT GGGCCGGGAA GCCCGGATCG
CCGAACTCCG GGTGGCCGAT GGCGACCGCC GCGGCCGCGC TCGACGTGCG ACTGGAGAAA
CCCGGTCACT ACGTCCTCAA CCCGGACGCG AGCCCGCCCA GCGTCGTCGA CGCGGAGCGG
GCGGTACGGC TCGTCGGCGT TTCCGGCGGG GTCGCGGTCG CTCTCGCGGC GGGATGGCTA
CTCGCGACAA GATGGCTCCC GGCTCCTGCG GGGGTGATCG GATGA
|
|---|
| Protein sequence | MATAPLLTPV LASLATLAIA VALDLALAEP PARVHPVALF GSVVGRFDRS WSRPRLVGVA
VAVGLPIGVA AFAGGIVAAA SFALPAFSAL PVLVAGTILF TTVSLRMLLA TTAEVVELTE
TDPDAARESV RALAGRDATD LSPADLRSAA VESAAENLAD GFVAPLGGFA LGATVGLAVG
GSEVALPLAA GVAAAVWVKA VNTLDSMLGY RSKPVGWASA RLDDAVMFLP ARVTAGCLSV
AAGSIEALRW AASWAGKPGS PNSGWPMATA AAALDVRLEK PGHYVLNPDA SPPSVVDAER
AVRLVGVSGG VAVALAAGWL LATRWLPAPA GVIG
|
|---|
| |