Gene Hlac_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0174 
Symbol 
ID7402103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp187023 
End bp188237 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content64% 
IMG OID643707237 
ProductSufBD protein 
Protein accessionYP_002564849 
Protein GI222478612 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA AAGCAATCGA GAGCCTCTCG GAGGACACGG TACGACGCAT CGCCGAGGAA 
CGCGACGAGC CCGAGTGGCT CTTAGAGACC CGTCTGAACG CGCTTTCCGC GCTAGAGACG
GCCGATCTGC CCGACGTCAT CCAGACGCCC GGCCGCCGCT GGACCGACCT GGAGGCGCTC
GACTTCGAGG CGCTCGTCGA CCCGCTGAAC CAGTCGGACA CGACCGAGCG GTCGGCCGGC
GATGACGATG TCGTCATCTT ACCCTTCAGC GAGGCATTCG ACGAGTACGG CGACATCATC
GAGGCGAACT TCGGGTCGGT ACTCGATCCC GAACACAACT ACCTCACCGC GCTGTCGGTC
GCGCTCTTCA CGACCGGGAC GTTCGTCTAC GTCCCCGAGG GCGTCGACGT CGAGGACGTG
ACGGTACGCG CGGAAATGAA CTCCCGCTCG CTGTTCAGCC AGACGCTGGT CGTCGCCGAG
GAGTCGTCGT CGGTGACGAT CCTCGAGTCG ATCGAGAGCG GTGACGACGG CGTCGACGGC
GACCGGTACT TCTCGAACCT CGTCGAGATC GTCGCGGGCG AGAACGCGAA CGTCCAGTTC
GGTTCGCTCC AGAACCTCGA CGACGACTCG TACACCTACT CGCTGAAGCG TGGCGTGACC
GACACGTACG CGACGGTTGA CTGGATCGAG AGCAACTTCG GCTCGAAGCT CACGCGCTCC
GACGTCGAGA CCGAACTGAA CGGCGACGGC TCCGAGAGCC AGATCGTCGG GACGTTCTTC
GGCACCGAAG ACCAGCACTT CGACATCAAC GCCCGCGTCT GGCACCAGGC CGAGCACACG
ACGGCCGACC TCGTCACGCG CGGCGTACTC GACGACGTGT CCCGCTCCGT CTACGAGGGG
GTTCAGGATG TCGGCGAGGA CGCGTGGAAC ACCTCCAGCT ACCAGCGCGA GAACACGCTG
ATGCTGTCGG ACGACGCCGA GGCCGACGCG TCGCCGAAGC TGATCATCCA CAACCACGAC
ACCGAGGCGT CCCACTCCGC GACCGTCGGA CAGGTCGACG CCGAGGACCT GTTCTACCTC
GAGAGTCGAA CGATCGACCC GCTGACGGCC CGAAACATGC TCGTCGAGGG CTTCTTCGTG
CCCGTGTTAG AGGAAATCGC AGTCGACGAG TTCCGCGACG ACGTCCAAGA ACTCGTCTTA
CAGCGCCTCC AGTAA
 
Protein sequence
MSTKAIESLS EDTVRRIAEE RDEPEWLLET RLNALSALET ADLPDVIQTP GRRWTDLEAL 
DFEALVDPLN QSDTTERSAG DDDVVILPFS EAFDEYGDII EANFGSVLDP EHNYLTALSV
ALFTTGTFVY VPEGVDVEDV TVRAEMNSRS LFSQTLVVAE ESSSVTILES IESGDDGVDG
DRYFSNLVEI VAGENANVQF GSLQNLDDDS YTYSLKRGVT DTYATVDWIE SNFGSKLTRS
DVETELNGDG SESQIVGTFF GTEDQHFDIN ARVWHQAEHT TADLVTRGVL DDVSRSVYEG
VQDVGEDAWN TSSYQRENTL MLSDDAEADA SPKLIIHNHD TEASHSATVG QVDAEDLFYL
ESRTIDPLTA RNMLVEGFFV PVLEEIAVDE FRDDVQELVL QRLQ