Gene Hlac_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0122 
Symbol 
ID7401643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp128659 
End bp129222 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID643707186 
Producthypothetical protein 
Protein accessionYP_002564798 
Protein GI222478561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0408082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCC GAACAGACCT ACTTCCGGCC GAACAGGTGT ACACGATCCT CGCGAACGAA 
CGCCGTCGGC GCGCTCTCGA ACAGCTCGGG AGCGTCGGCG GCGTCGTGAC GGTTCACGAG
CTGTCGGCGC TGGTCGCGGG CCACGAGACC GGCGAGAGCC CGCCGCCGAA GCGCTGTCGC
GAGAGCGTGT ACACGTCGCT CGTGCAGACG CACCTCCCGA AGCTCGAAGA GCTCGGCGTG
ATCGAGTACG ACCGGGAGAC CCAGACGATC GAGGTGTCCC GGCACGCGCG GGACGTGGCG
CTGTACACCG AGGTGGTCGC GAGCGCCGGC GTCACGTGGT CGGAGCTGTA CCGCGCGCTC
GGCGTCGTCT CCTTGACGGT CCTGCTCGCG GCGCTGCTCG GCGTCCCCCT CGTCTCCGCG
ATCGATCCGG TCCTGCTGAC GAGCCTCGCG CTCGCGCTGT TCGCCGCCGC GAGCGCCTAC
CAACTGTGGA TCAACCGTTT CTCCGTGCTC CGGCAGCTTC GAGCCGGCCG AAGTGCCACC
CTCCGTCTGC GACGACGCGG CTGA
 
Protein sequence
MKLRTDLLPA EQVYTILANE RRRRALEQLG SVGGVVTVHE LSALVAGHET GESPPPKRCR 
ESVYTSLVQT HLPKLEELGV IEYDRETQTI EVSRHARDVA LYTEVVASAG VTWSELYRAL
GVVSLTVLLA ALLGVPLVSA IDPVLLTSLA LALFAAASAY QLWINRFSVL RQLRAGRSAT
LRLRRRG