Gene Hlac_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0118 
Symbol 
ID7401639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp123355 
End bp123705 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content62% 
IMG OID643707182 
ProductProtein of unknown function DUF1621 
Protein accessionYP_002564794 
Protein GI222478557 
COG category[S] Function unknown 
COG ID[COG2450] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATTA TGAGCAAGAT CCTCGGCGGC GGCGGGAACC GCTCCGTCGA CGATTACGTC 
GAGCTCGACC TCGACGACTT TGCCGAGGCG CACGCGGAAA CGGGCATGCA GGTACATATT
GCGGAGATCG GCGACCAGGG CGACGTGATC CCGATCAAAG ACGCCGTCTA CGACGGCGAC
TTCGTCATCG CAGACATCAC CCGCCACTCT ACGTCGGACC GGACGATCGA ACACATCATC
GACGAGCTAC GGCAGGTCGC CCGAGAGGTC GACGGCGACA TCGTCCAGAA GGGCGACGAC
CAGATCATCG TCACGCCGAC CGGCGTGAGC ATCTCGCGAG AGAAGCTGTA G
 
Protein sequence
MGIMSKILGG GGNRSVDDYV ELDLDDFAEA HAETGMQVHI AEIGDQGDVI PIKDAVYDGD 
FVIADITRHS TSDRTIEHII DELRQVAREV DGDIVQKGDD QIIVTPTGVS ISREKL