Gene Hlac_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0097 
Symbol 
ID7401615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp99610 
End bp100083 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID643707158 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_002564773 
Protein GI222478536 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT CAGGACAGAC GGTCGCGACG GCGCTCAACG CGGGCGGCGC CGACCTCGAC 
GACACACAGC GACAGCCGAA CGGCGTCGAC CTGACGGTCG GTGCGATCTA CGAGCAGACG
GAGCCGGGCG CGATCCGCCG CGACGGCAAG CGGGTCGGCG AGCGCGAGGA GATCGAACCG
GAGGACGGCG CGTACCGGCT GGAAGCAGGC ACGTACGTGG TCCGGTACGG TGAACCGGTT
CGGATCCCCG ACGAGCGGAT CGGCTTTGTG CTCCCGCGGT CGACGCTGCT GCGCAACTCC
TGTACTATCG ACACCGCGGT CTGGGACGCG GGCTACGAAG GCGTCGGCGA GGGGCGCCTC
GACGTGGGCC ACGCGATCGC GATCGAGCCG GGAGCGCGGA TCGCCCAGCT AGTGCTCGCG
ACGGCCGACC ATGACGGGAC CTACGACGGG ACGTATCAAG GCGAGCGGCT CTAG
 
Protein sequence
MFDSGQTVAT ALNAGGADLD DTQRQPNGVD LTVGAIYEQT EPGAIRRDGK RVGEREEIEP 
EDGAYRLEAG TYVVRYGEPV RIPDERIGFV LPRSTLLRNS CTIDTAVWDA GYEGVGEGRL
DVGHAIAIEP GARIAQLVLA TADHDGTYDG TYQGERL