| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0058 |
|---|
| Symbol | |
|---|
| ID | 7401413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 59697 |
|---|
| End bp | 60437 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643707119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002564734 |
|---|
| Protein GI | 222478497 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1637] Predicted nuclease of the RecB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000572818 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACAGTAA CGAGCGTCCA CGACCCGAGC CACCGCGAGG CCCTCTGGGA ACTCGAAGAC
GCCTTCGAGG GCGGCGATCT GATAAGCCTC TTCGGCCGCT GTACGGTCAG CTACGAGGGC
CGCGCCGCCT CCGACCTCGG CGCCGGCGAC CGGCTGCTCG TGTTAAAGCC CGACGGCGCC
GCCCTCGTCC ACACCGACGA GGGGCGCCAG CCGGTCAACT GGCAGCCGCC GGGATCGGAA
CACCACGCCG CGGTGCGCGA GGGACAACTT CGCGTACGCT CGACCAGAAG CAACCCCGAC
GAGACGCTGA CGGTCCGCTT TTCCGACATC CACCAGCTCT CTGCGATGGC GGTCACCGGC
GGGCGCGACC TCACGCTCCA CGGGAGCGAG GAGGACCTTC GGACCAGAAT CTTGGAACGC
CCCGAACTCG TCGAGCCGGG GTTCGAGCCC CGCGAGACCG AGCGCCCCTC CAGCGCCGGC
CCGATGGACG TGTTCGGCGT CGACGCCGAC GGTGACCCGG TCGTCGTCGA GCTGAAACGC
CGGCGGGTTG GCCCGGACGC GGTCGGGCAA CTCGCCCGGT ACGTGCGGGC GCTCCGGGCG
GAGCTGGGAG CGGAAGAAGG AGCCGACACC CCCGTCGTCC GCGGAGTGCT CGTCGCGCCC
TCGGTCACCG ATCGGGCCGC GGAGCGGCTC GCAGACCGCG GGTTCGACCA CGTCGCGCTC
GACCCGACGC CGGAGGAGTG A
|
|---|
| Protein sequence | MTVTSVHDPS HREALWELED AFEGGDLISL FGRCTVSYEG RAASDLGAGD RLLVLKPDGA
ALVHTDEGRQ PVNWQPPGSE HHAAVREGQL RVRSTRSNPD ETLTVRFSDI HQLSAMAVTG
GRDLTLHGSE EDLRTRILER PELVEPGFEP RETERPSSAG PMDVFGVDAD GDPVVVELKR
RRVGPDAVGQ LARYVRALRA ELGAEEGADT PVVRGVLVAP SVTDRAAERL ADRGFDHVAL
DPTPEE
|
|---|
| |