| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0053 |
|---|
| Symbol | |
|---|
| ID | 7401406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 52649 |
|---|
| End bp | 53089 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643707112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002564729 |
|---|
| Protein GI | 222478492 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00139933 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGAGA TCGAGTACCC ACACGTCGAA CTAATCGTGA CAAATTACAC GCGGTTGAGC
GAGGAGTCAC AGTACAGGGA CGACCTCCTC ATCAGGGCGA ATTACTTCTC TCTTGCAGTC
ATCGCGGTAC TGATCGGAAC GCTACTGCAG GCCAGTCCCG TGGTTCGCCC ACTCGTCGCG
ATGGCCGGGG TAGCGATCGC GTACTCGTTC TGGCTCGCGA CTGAATCGTA CAAAGGGGCG
AGAGACGTAC TGAACGACAG CATGCGGCGT ACCGAAACGC AGTTCGAGGA GCTGTCCGTG
GTAGAAGACT ACGACACGCG GTCTCGGTCA CAGATCGAGA AGCGGAGCCT CTCTTCGTAC
TTTATCGGTC TCCAGATGAC GACGACGTTC GTCTGGTTGG TCCTGTACGC GTTACTCGTG
ACAGAGTTCG TCTACCTCTA G
|
|---|
| Protein sequence | MGEIEYPHVE LIVTNYTRLS EESQYRDDLL IRANYFSLAV IAVLIGTLLQ ASPVVRPLVA
MAGVAIAYSF WLATESYKGA RDVLNDSMRR TETQFEELSV VEDYDTRSRS QIEKRSLSSY
FIGLQMTTTF VWLVLYALLV TEFVYL
|
|---|
| |