Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0051 |
Symbol | |
ID | 7401404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 50898 |
End bp | 51791 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643707110 |
Product | hypothetical protein |
Protein accession | YP_002564727 |
Protein GI | 222478490 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.134629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000640863 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCACAGAG AGTTCCGCGA GTGGGTCGAC TTTGGAGCCG ACGGGCGTGC GCCCGAGTCT GTTTCGATCG ACTATCGACC CGACGCGATG GCGTCCGTGG TAGAGGACCA ATCTGAGCGT ATCGACCGGC TCTGGGAGAG CGCGAAGCGG GAACGGCCGG GCCTGTTCGA CGCCCCCGGC TTTCGACTCC TGGAAGCGTC GGATACCGGA ATCGTGGTCG GGCCGGCGCA GTTCAAACAG CACTTCGTAC GCCGACTGTT GCTCTCCGAT TCCCTCGAAA CGTCGGCGAC CAGGTTGAGA GACGAACTTG AGGAATCGAT CCGATACCTG TCTTCGATGG TCGCCATCGT CGCCGGTGAC GATCTTCTGA TCGGCGTGAA AAGGCGCACG GATAGCAACT TCCTCTCCCT GCCGGGGAGC GGCTATCTCG ACCGAAACGG AGACATGCGC GCGGGCGAAC TCTGCCCGAC CGCGGAGATT GTCGCCCGTG AAGTGTACGA GGAAACCGGT CTGGAGGATT TAGATCGGAT CCGTTGTTTC GGTATCTTCG AAGACCTGCA TCCGGAGTCA CACCTCAATC CGGCGCTGTT TTCAATCATT ACGACCTCTC GATCGTCAGA CCACGTCCTC GATCGTATCG ATCGAGCCGA AGACGCCGAC GAGTTCGATC GATTCCTCGC TGTTCCGCTG CGACCGGACG CGCTCTCCGC GCTCATTCGG ACCGACACGA ACGACGCCGA ACTCCCGGTA GCGGCTCCGA AATTGGAGGG CGATCTGAAT GGGATCTCGG ACAAGACGTT GCTCATGTTA CTGCTGATCG GGCGGAATCG GTTCGGCCGC GACTGGTTCC AACGCGAACT GGCGAACTCT TCCGTCGTTC TGGTGCGGAA ATGA
|
Protein sequence | MHREFREWVD FGADGRAPES VSIDYRPDAM ASVVEDQSER IDRLWESAKR ERPGLFDAPG FRLLEASDTG IVVGPAQFKQ HFVRRLLLSD SLETSATRLR DELEESIRYL SSMVAIVAGD DLLIGVKRRT DSNFLSLPGS GYLDRNGDMR AGELCPTAEI VAREVYEETG LEDLDRIRCF GIFEDLHPES HLNPALFSII TTSRSSDHVL DRIDRAEDAD EFDRFLAVPL RPDALSALIR TDTNDAELPV AAPKLEGDLN GISDKTLLML LLIGRNRFGR DWFQRELANS SVVLVRK
|
| |