Gene Hlac_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0047 
Symbol 
ID7401400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp48991 
End bp49305 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content67% 
IMG OID643707106 
Productferredoxin 
Protein accessionYP_002564723 
Protein GI222478486 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.208509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00273393 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGACCG TATCCTACCA AGGCGAGGAG ATTGAGTGTG AGGAGGGGGC GATCCTCCGC 
GACGTGCTCA AAGAGGCCGG CCTCTCGGTG TACAACGGGC GGGCCGAGCA GTTCAACTGC
CGCGGAACCG GGTCGTGTGG CACCTGCGCC GTGCAGGTCG ACGGTGCGGT CAGCGAGCCG
GGGAAGAAGG AGAAGGCTCG CCTCTGGTTA CCCCCGCATC ACCCGAGTCA CGACGTGCGC
CTCGCGTGTC AGACTCGCGT CGAGGGCGAC GTCGAGGTGC GAAAGGGCCG CGGGCTCTGG
GGGCAACACA TCTGA
 
Protein sequence
MPTVSYQGEE IECEEGAILR DVLKEAGLSV YNGRAEQFNC RGTGSCGTCA VQVDGAVSEP 
GKKEKARLWL PPHHPSHDVR LACQTRVEGD VEVRKGRGLW GQHI