Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0047 |
Symbol | |
ID | 7401400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 48991 |
End bp | 49305 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707106 |
Product | ferredoxin |
Protein accession | YP_002564723 |
Protein GI | 222478486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.208509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00273393 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACCG TATCCTACCA AGGCGAGGAG ATTGAGTGTG AGGAGGGGGC GATCCTCCGC GACGTGCTCA AAGAGGCCGG CCTCTCGGTG TACAACGGGC GGGCCGAGCA GTTCAACTGC CGCGGAACCG GGTCGTGTGG CACCTGCGCC GTGCAGGTCG ACGGTGCGGT CAGCGAGCCG GGGAAGAAGG AGAAGGCTCG CCTCTGGTTA CCCCCGCATC ACCCGAGTCA CGACGTGCGC CTCGCGTGTC AGACTCGCGT CGAGGGCGAC GTCGAGGTGC GAAAGGGCCG CGGGCTCTGG GGGCAACACA TCTGA
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Protein sequence | MPTVSYQGEE IECEEGAILR DVLKEAGLSV YNGRAEQFNC RGTGSCGTCA VQVDGAVSEP GKKEKARLWL PPHHPSHDVR LACQTRVEGD VEVRKGRGLW GQHI
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