| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_2417 |
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| Symbol | |
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| ID | 4710937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 2652531 |
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| End bp | 2654198 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639856893 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001003982 |
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| Protein GI | 121999195 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.757899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTGAAC TGATGCCCTT CCTGCGCGAT CTGCGCCCGG AGTGCTGGCG CCTGGCCCTC
GGCACGCTGC TGCTGATCGT CAGCCTTGCG GCCAGCATCG GCCTGATGGG GCTTTCCGGC
TGGTTCATCA CCGCCACCGC GGTCGCCGGG CTGACCGGGG CCTACCTGGA CATCTACCGG
CCGAGCGCCG GCATCCGCTT CTTCGCCCTG GCGCGGTCGA TTTCCCGTTA CTTCGAGCGC
CTGGTCCACC ACGATGCGGT CCTGCGCACC CTGGCGCGCC TGCGCGGCTG GCTGTTCCGA
ACCCTGGCGC CGCTGCCTCT GGCCCGCGTC GGCCGGCTGC GCCGCAGCGA CCTGCTCAAT
CGCATGACCG CCGACGTCGA GGCCCTGGAC AACCTCTACC TGCGGATCAT CGGCCCGAGC
CTGGCCGCCG TGGTGACCTT GGGGGGGACC ATCGCCGTGC TGGTCCTGCT GGCTGGTCCG
GCGGGGCTGG CGGTCGGAGC GGTGCTGCTG GCCGGTGGGA TTCTCCTGCC GCTGTGGGCC
TGGCGTCGCG GTTCGCCGCA CGGCGAGGCG GTGGACCGGC ACCTGCCGGC CCTGCGCGGG
GCCGGTGTCG ATGCCGTCCA GGGGCTGGCC GAGTTGCGGG CCTGCGGTGC GGTGGGCCGC
CACGAGCAGC GCCTGATGGC GGCCGCTGAT GGCCTCGCGG CGGCGCGGGC CCGGGCGGCC
CGCCTGACCG GGGCCGGCGA GGGGGCGGTG GGACTGCTCG CCCACGGTGC GCTGCTCGCG
GCGCTGGTGG TCGGTATCCC GCTCTACCAG GCCGAGGCCA TCAGCGGTCC GCTGCTGGCG
CTGGTGGCCC TCGCCGCCCT GGCCGGTGGC GAGGCGCTGA CTGCGCTGCC GGGGGCGTGG
CAGCACCTGG GTCGCACCCG GGCCGCGGCA CGCCGCCTGC TCGAGCACGC CGATACCGCC
GCCGACGAAT CCGCGGCGGT GGTGGATCCG CCCCCCCGCC AGGCCCTCGG CCTAGCCCTG
GCGGGGGTCA CGTTTCGCCA CGCGGCGCAT ACGCCCCCGG TCCTCCGTGA TGGCTCGCTG
ACCGTCGCCC CGGGCGAGAC GGTGGTGATC CACGGTCCTT CCGGCTGCGG CAAGTCGACC
CTGCTCGATC TCGTGGCGGG CTTGATCCGG CCCGATGCCG GGACGGTCAC CCTGGAGGGG
GTCCCCGTCC ACGCCCTGGC CGAGGCGGAG CGTTTTGCGC GCATCACCTA CCTGACCCAG
CGCACCGAAC TCTTCGCCGA CAGCGTTGCC GGCAACCTGC GCATCGTCGA TCCCCGGGCG
GACGAGGCCC GCATGTGGCA GGCGCTGCAC ACCGTCGGCC TCGACGAACG GGTGCGTAGC
GCCCCGCGGG GCCTCGACGA GTGGGTCGGG GAGGGGGGCG GACGCCTCTC CGGCGGCGAG
GCGCGGCGGC TGGCCCTGGC TCGTCTGGTG CTGACCGACG CCCCGGTAGT CCTTCTCGAC
GAGCCCTTCC GCGGACTCGA CGATGCCACG GCCGCCGAGG TCGCCCGGCG GCTGGCGCCA
TGGCTGGCCG AGCGCACCGC GCTCATCATC AGCCACGACC CGGACAGCGC CCCGCCGCAC
GATCGGCGCC TGCCGTTCTT CGAACTTATC GCCCCTGGCG GCGAATAA
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| Protein sequence | MRELMPFLRD LRPECWRLAL GTLLLIVSLA ASIGLMGLSG WFITATAVAG LTGAYLDIYR
PSAGIRFFAL ARSISRYFER LVHHDAVLRT LARLRGWLFR TLAPLPLARV GRLRRSDLLN
RMTADVEALD NLYLRIIGPS LAAVVTLGGT IAVLVLLAGP AGLAVGAVLL AGGILLPLWA
WRRGSPHGEA VDRHLPALRG AGVDAVQGLA ELRACGAVGR HEQRLMAAAD GLAAARARAA
RLTGAGEGAV GLLAHGALLA ALVVGIPLYQ AEAISGPLLA LVALAALAGG EALTALPGAW
QHLGRTRAAA RRLLEHADTA ADESAAVVDP PPRQALGLAL AGVTFRHAAH TPPVLRDGSL
TVAPGETVVI HGPSGCGKST LLDLVAGLIR PDAGTVTLEG VPVHALAEAE RFARITYLTQ
RTELFADSVA GNLRIVDPRA DEARMWQALH TVGLDERVRS APRGLDEWVG EGGGRLSGGE
ARRLALARLV LTDAPVVLLD EPFRGLDDAT AAEVARRLAP WLAERTALII SHDPDSAPPH
DRRLPFFELI APGGE
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