Gene Hhal_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2392 
Symbol 
ID4710161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand+ 
Start bp2628659 
End bp2629303 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID639856867 
Productcytochrome c, class I 
Protein accessionYP_001003957 
Protein GI121999170 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAGC GCACCCTGAC CGGCTACACG GTCGCTGCCC TCGCGCTCGG CGCGACCACC 
GCCCAGGCCG AGATCGACCT GGATGCGGGC GAGCAGCTCA ACAACGAGGT CTGCGTGGCC 
TGCCACGGCG CCACCGGTGT CAGCGATGTG CCCGAGTGGC CGAGCCACGC CGGGCAGCAT 
AAGGACTACA TCGTCTACCA CATGGAACTG TTCCGGGACG AGAACCGCTG GGACCCGGAG 
TTCCTGATGA CGCCCAACGC CACGGAGCTC TCGGATGAGG ACATCCGCAA CGTGGCCGCC 
TGGCTCGAGA AGCAGGATCC GCCGCCGTCC CAGGACGTGG ACGAAGAGCT GGCCGAGCAG 
GGCCGCGAGA TCTACCACAG CGGTATCGCC GATCAGAACG TCGCCTCCTG CGCCTCGTGC 
CACGGGCCCA ACGGCGAGGG CATCAAGGGC GGCCAGTTCG CTGCGGTGGC CGGTCAGCAA 
GAGATCTACC TCAACGACTC CCTGACGGCG TTCAAGAACG AGGACCGCGA GAGCGATCGC 
AACCGCATGA TGCGCGACAC CGCGGGCCGT ATGACCGAGG AGGACATCGA GGCCGTCTCC 
GCCTACATGG CGAGCATGAC GCTGCTCGAC GACGAGGACG AGTGA
 
Protein sequence
MHKRTLTGYT VAALALGATT AQAEIDLDAG EQLNNEVCVA CHGATGVSDV PEWPSHAGQH 
KDYIVYHMEL FRDENRWDPE FLMTPNATEL SDEDIRNVAA WLEKQDPPPS QDVDEELAEQ 
GREIYHSGIA DQNVASCASC HGPNGEGIKG GQFAAVAGQQ EIYLNDSLTA FKNEDRESDR 
NRMMRDTAGR MTEEDIEAVS AYMASMTLLD DEDE