Gene Hhal_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_2374 
Symbol 
ID4709255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp2608305 
End bp2608736 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content72% 
IMG OID639856849 
Productgeneral secretion pathway protein I 
Protein accessionYP_001003939 
Protein GI121999152 
COG category 
COG ID 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.764605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGGC CCAGCCGTGG CTTTACCCTG ATGGAGGTCC TGGTGGCCGT GGCCATCCTG 
GCCACCGCCC TGGCCGCCGC CATCCGCGTC GGCAGCCAGG CCGCGGGGAA CACCGTGGAG
CTGCGCGAGC GCGCCTACGC CGGATGGGTG GCTGAGAATG AGCTGGCCCG CATCCAGTCC
GGCATGCAGC CGCTGGACGG CGCCACGGTG CGCAACGGCA GCGCCGAGAT GGCCGGCATG
GAGTGGGACT GGGAGCTCAC CGCCGAGGAA GCCGACCCGC CGGTGCCGGT GGACCTGGAA
CTGGCCGGAC TGCTGGAGCT GCAGGTGGCG GTCTACCGCA GCGGCGAGAC GGAGCGGCCG
GTGGCCACGC GATCGCTGTG GTACCGGAGC CCGCGGGCCG AACTCGAGGA CGACGAGGCG
AACGATGACT GA
 
Protein sequence
MTRPSRGFTL MEVLVAVAIL ATALAAAIRV GSQAAGNTVE LRERAYAGWV AENELARIQS 
GMQPLDGATV RNGSAEMAGM EWDWELTAEE ADPPVPVDLE LAGLLELQVA VYRSGETERP
VATRSLWYRS PRAELEDDEA NDD